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Protein

Ribose import ATP-binding protein RbsA

Gene

rbsA

Organism
Chelativorans sp. (strain BNC1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system.UniRule annotation

Catalytic activityi

ATP + H2O + monosaccharide(Out) = ADP + phosphate + monosaccharide(In).UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi37 – 448ATPUniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Sugar transport, Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciCSP266779:GI09-3769-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribose import ATP-binding protein RbsAUniRule annotation (EC:3.6.3.17UniRule annotation)
Gene namesi
Name:rbsAUniRule annotation
Ordered Locus Names:Meso_3706
OrganismiChelativorans sp. (strain BNC1)
Taxonomic identifieri266779 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeChelativorans
ProteomesiUP000001820 Componenti: Chromosome

Subcellular locationi

  • Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 506506Ribose import ATP-binding protein RbsAPRO_0000261073Add
BLAST

Interactioni

Subunit structurei

The complex is composed of two ATP-binding proteins (RbsA), two transmembrane proteins (RbsC and RbsD) and a solute-binding protein (RbsB).UniRule annotation

Protein-protein interaction databases

STRINGi266779.Meso_3706.

Structurei

3D structure databases

ProteinModelPortaliQ11C01.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini5 – 237233ABC transporter 1UniRule annotationAdd
BLAST
Domaini249 – 492244ABC transporter 2UniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. [View classification]UniRule annotation
Contains 2 ABC transporter domains.UniRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiCOG1129.
KOiK10441.
OMAiIRINTTM.
OrthoDBiEOG6QK4RR.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR015861. ABC_transpr_RbsA.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 2 hits.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 2 hits.
PS51254. RBSA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q11C01-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDFVQLIGI EKHFGGIAAL KSVDFTVKSG EVHALIGENG AGKSTLMGVL
60 70 80 90 100
SGNVIPTAGT ISVEGCVRRF STPGDAIAAG IAMIHQELVL APDLTVAENI
110 120 130 140 150
FMNRMPRLID WAKLRRDAAQ ILDRLGFEID PGATIGDLPL AQRQIVEIAK
160 170 180 190 200
ALSLNARLII FDEPTAVLGP SDARRLLNLI RSLRSEGVAI VYISHRLDEV
210 220 230 240 250
ADIADRVTVL NDGSLIATRA AKDVTIEEMV RLMVGRPISA LFGEKRTSPF
260 270 280 290 300
GAEIFRVESL TAGPLVQDLS FGVRAGEIVG LGGLIGSGRT ETARAIFGAD
310 320 330 340 350
KRESGRIFID GSQVKIRDPR DAVKAGIGLV PEDRRGQGVV IDASIRINTT
360 370 380 390 400
MTSLRRFSPA GIIKRTFERR FVGEKIAALK VKSAGIDAPV QSLSGGNQQK
410 420 430 440 450
VVIGKWVDVA SKVIILDEPT RGVDVGAKSE IYAIIRRLAD EGRAVLLISS
460 470 480 490 500
DHQELFGLCD RVLVMGRGRI RSELLPGEFD EERLLSASLA IEPIQTTVRT

DQNPAG
Length:506
Mass (Da):54,397
Last modified:August 22, 2006 - v1
Checksum:i35EEB7EB3EF1C9A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000390 Genomic DNA. Translation: ABG65074.1.
RefSeqiWP_011583015.1. NC_008254.1.

Genome annotation databases

EnsemblBacteriaiABG65074; ABG65074; Meso_3706.
KEGGimes:Meso_3706.
PATRICi21347766. VBICheSp72577_4483.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000390 Genomic DNA. Translation: ABG65074.1.
RefSeqiWP_011583015.1. NC_008254.1.

3D structure databases

ProteinModelPortaliQ11C01.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266779.Meso_3706.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG65074; ABG65074; Meso_3706.
KEGGimes:Meso_3706.
PATRICi21347766. VBICheSp72577_4483.

Phylogenomic databases

eggNOGiCOG1129.
KOiK10441.
OMAiIRINTTM.
OrthoDBiEOG6QK4RR.

Enzyme and pathway databases

BioCyciCSP266779:GI09-3769-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR015861. ABC_transpr_RbsA.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 2 hits.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 2 hits.
PS51254. RBSA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BNC1.

Entry informationi

Entry nameiRBSA_CHESB
AccessioniPrimary (citable) accession number: Q11C01
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: August 22, 2006
Last modified: July 22, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.