Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q11BH8

- TYPH_CHESB

UniProt

Q11BH8 - TYPH_CHESB

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Putative thymidine phosphorylase

Gene

Meso_3880

Organism
Chelativorans sp. (strain BNC1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. phosphorylase activity Source: InterPro
  2. thymidine phosphorylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. pyrimidine nucleobase metabolic process Source: InterPro
  2. pyrimidine nucleoside metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciCSP266779:GI09-3943-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative thymidine phosphorylaseUniRule annotation (EC:2.4.2.4UniRule annotation)
Alternative name(s):
TdRPaseUniRule annotation
Gene namesi
Ordered Locus Names:Meso_3880
OrganismiChelativorans sp. (strain BNC1)
Taxonomic identifieri266779 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeChelativorans
ProteomesiUP000001820: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 509509Putative thymidine phosphorylasePRO_0000314702Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi266779.Meso_3880.

Structurei

3D structure databases

ProteinModelPortaliQ11BH8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0213.
HOGENOMiHOG000252767.
KOiK00758.
OMAiRVECAIT.
OrthoDBiEOG61ZTGG.

Family and domain databases

Gene3Di3.40.1030.10. 1 hit.
3.90.1170.30. 1 hit.
HAMAPiMF_00703. Thymid_phosp_2.
InterProiIPR000312. Glycosyl_Trfase_fam3.
IPR017459. Glycosyl_Trfase_fam3_N_dom.
IPR013102. PYNP_C.
IPR000053. Pyrmidine_PPase.
IPR017872. Pyrmidine_PPase_CS.
IPR028579. Thym_Pase_Put.
IPR013466. Thymidine/AMP_Pase.
[Graphical view]
PANTHERiPTHR10515. PTHR10515. 1 hit.
PfamiPF02885. Glycos_trans_3N. 1 hit.
PF00591. Glycos_transf_3. 1 hit.
PF07831. PYNP_C. 1 hit.
[Graphical view]
PIRSFiPIRSF000478. TP_PyNP. 1 hit.
SMARTiSM00941. PYNP_C. 1 hit.
[Graphical view]
SUPFAMiSSF47648. SSF47648. 1 hit.
SSF52418. SSF52418. 1 hit.
SSF54680. SSF54680. 1 hit.
TIGRFAMsiTIGR02645. ARCH_P_rylase. 1 hit.
PROSITEiPS00647. THYMID_PHOSPHORYLASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q11BH8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTALVSPAGP EQPSLRVRRL LLHTQHQPVV VMHTDCHVCR SEGLAARSQV
60 70 80 90 100
LLTNGARQVH ATLFQVDGDA VLSHDEVGLS ETAWDLLGVA EGDEVRVSHP
110 120 130 140 150
PALESLASVR RRIYGHRLDA QALSEIVRDV AAGRYTDVHL AAFLTASAAL
160 170 180 190 200
PLDENETADL TGAMIAVGDR MEWDAPTVVD KHCVGGLPGN RTTPIVVAIV
210 220 230 240 250
AANGLVMPKT SSRAITSPAG TADTMETLAP VDLDLATLRR VVEAEGGCIA
260 270 280 290 300
WGGAVHLSPA DDIFVRVERE LDVDTEGQLI ASVLSKKISA GSTHVVIDIP
310 320 330 340 350
VGPTAKVRGE DAASHLASRI TAVASRFGLA ATCVQTDGSQ PVGRGIGPAL
360 370 380 390 400
EAFDVLAVLQ NASDAPDDLR RRAATLAGAA LEIGRKAGKG EGTALALETL
410 420 430 440 450
ADGRAWKKFE AICEAQGGLR APPRAAHVHP LVAPRAGRVV HINNRKLSRL
460 470 480 490 500
AKLAGAPESK AGGVHMDVRL GDEIDRGQPL LHVHAETTGE LAYALDYAAR

AGDIVEIEA
Length:509
Mass (Da):53,390
Last modified:August 22, 2006 - v1
Checksum:i585D372C3D867E70
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000390 Genomic DNA. Translation: ABG65247.1.
RefSeqiWP_011583188.1. NC_008254.1.
YP_676412.1. NC_008254.1.

Genome annotation databases

EnsemblBacteriaiABG65247; ABG65247; Meso_3880.
GeneIDi4181668.
KEGGimes:Meso_3880.
PATRICi21348140. VBICheSp72577_4670.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000390 Genomic DNA. Translation: ABG65247.1 .
RefSeqi WP_011583188.1. NC_008254.1.
YP_676412.1. NC_008254.1.

3D structure databases

ProteinModelPortali Q11BH8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266779.Meso_3880.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG65247 ; ABG65247 ; Meso_3880 .
GeneIDi 4181668.
KEGGi mes:Meso_3880.
PATRICi 21348140. VBICheSp72577_4670.

Phylogenomic databases

eggNOGi COG0213.
HOGENOMi HOG000252767.
KOi K00758.
OMAi RVECAIT.
OrthoDBi EOG61ZTGG.

Enzyme and pathway databases

BioCyci CSP266779:GI09-3943-MONOMER.

Family and domain databases

Gene3Di 3.40.1030.10. 1 hit.
3.90.1170.30. 1 hit.
HAMAPi MF_00703. Thymid_phosp_2.
InterProi IPR000312. Glycosyl_Trfase_fam3.
IPR017459. Glycosyl_Trfase_fam3_N_dom.
IPR013102. PYNP_C.
IPR000053. Pyrmidine_PPase.
IPR017872. Pyrmidine_PPase_CS.
IPR028579. Thym_Pase_Put.
IPR013466. Thymidine/AMP_Pase.
[Graphical view ]
PANTHERi PTHR10515. PTHR10515. 1 hit.
Pfami PF02885. Glycos_trans_3N. 1 hit.
PF00591. Glycos_transf_3. 1 hit.
PF07831. PYNP_C. 1 hit.
[Graphical view ]
PIRSFi PIRSF000478. TP_PyNP. 1 hit.
SMARTi SM00941. PYNP_C. 1 hit.
[Graphical view ]
SUPFAMi SSF47648. SSF47648. 1 hit.
SSF52418. SSF52418. 1 hit.
SSF54680. SSF54680. 1 hit.
TIGRFAMsi TIGR02645. ARCH_P_rylase. 1 hit.
PROSITEi PS00647. THYMID_PHOSPHORYLASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BNC1.

Entry informationi

Entry nameiTYPH_CHESB
AccessioniPrimary (citable) accession number: Q11BH8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: August 22, 2006
Last modified: October 1, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3