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Q11BH8

- TYPH_CHESB

UniProt

Q11BH8 - TYPH_CHESB

Protein

Putative thymidine phosphorylase

Gene

Meso_3880

Organism
Chelativorans sp. (strain BNC1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (22 Aug 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

    GO - Molecular functioni

    1. phosphorylase activity Source: InterPro
    2. thymidine phosphorylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. pyrimidine nucleobase metabolic process Source: InterPro
    2. pyrimidine nucleoside metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Enzyme and pathway databases

    BioCyciCSP266779:GI09-3943-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative thymidine phosphorylaseUniRule annotation (EC:2.4.2.4UniRule annotation)
    Alternative name(s):
    TdRPaseUniRule annotation
    Gene namesi
    Ordered Locus Names:Meso_3880
    OrganismiChelativorans sp. (strain BNC1)
    Taxonomic identifieri266779 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeChelativorans
    ProteomesiUP000001820: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 509509Putative thymidine phosphorylasePRO_0000314702Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi266779.Meso_3880.

    Structurei

    3D structure databases

    ProteinModelPortaliQ11BH8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0213.
    HOGENOMiHOG000252767.
    KOiK00758.
    OMAiRVECAIT.
    OrthoDBiEOG61ZTGG.

    Family and domain databases

    Gene3Di3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    HAMAPiMF_00703. Thymid_phosp_2.
    InterProiIPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    IPR028579. Thym_Pase_Put.
    IPR013466. Thymidine/AMP_Pase.
    [Graphical view]
    PANTHERiPTHR10515. PTHR10515. 1 hit.
    PfamiPF02885. Glycos_trans_3N. 1 hit.
    PF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000478. TP_PyNP. 1 hit.
    SMARTiSM00941. PYNP_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsiTIGR02645. ARCH_P_rylase. 1 hit.
    PROSITEiPS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q11BH8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTALVSPAGP EQPSLRVRRL LLHTQHQPVV VMHTDCHVCR SEGLAARSQV    50
    LLTNGARQVH ATLFQVDGDA VLSHDEVGLS ETAWDLLGVA EGDEVRVSHP 100
    PALESLASVR RRIYGHRLDA QALSEIVRDV AAGRYTDVHL AAFLTASAAL 150
    PLDENETADL TGAMIAVGDR MEWDAPTVVD KHCVGGLPGN RTTPIVVAIV 200
    AANGLVMPKT SSRAITSPAG TADTMETLAP VDLDLATLRR VVEAEGGCIA 250
    WGGAVHLSPA DDIFVRVERE LDVDTEGQLI ASVLSKKISA GSTHVVIDIP 300
    VGPTAKVRGE DAASHLASRI TAVASRFGLA ATCVQTDGSQ PVGRGIGPAL 350
    EAFDVLAVLQ NASDAPDDLR RRAATLAGAA LEIGRKAGKG EGTALALETL 400
    ADGRAWKKFE AICEAQGGLR APPRAAHVHP LVAPRAGRVV HINNRKLSRL 450
    AKLAGAPESK AGGVHMDVRL GDEIDRGQPL LHVHAETTGE LAYALDYAAR 500
    AGDIVEIEA 509
    Length:509
    Mass (Da):53,390
    Last modified:August 22, 2006 - v1
    Checksum:i585D372C3D867E70
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000390 Genomic DNA. Translation: ABG65247.1.
    RefSeqiWP_011583188.1. NC_008254.1.
    YP_676412.1. NC_008254.1.

    Genome annotation databases

    EnsemblBacteriaiABG65247; ABG65247; Meso_3880.
    GeneIDi4181668.
    KEGGimes:Meso_3880.
    PATRICi21348140. VBICheSp72577_4670.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000390 Genomic DNA. Translation: ABG65247.1 .
    RefSeqi WP_011583188.1. NC_008254.1.
    YP_676412.1. NC_008254.1.

    3D structure databases

    ProteinModelPortali Q11BH8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 266779.Meso_3880.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABG65247 ; ABG65247 ; Meso_3880 .
    GeneIDi 4181668.
    KEGGi mes:Meso_3880.
    PATRICi 21348140. VBICheSp72577_4670.

    Phylogenomic databases

    eggNOGi COG0213.
    HOGENOMi HOG000252767.
    KOi K00758.
    OMAi RVECAIT.
    OrthoDBi EOG61ZTGG.

    Enzyme and pathway databases

    BioCyci CSP266779:GI09-3943-MONOMER.

    Family and domain databases

    Gene3Di 3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    HAMAPi MF_00703. Thymid_phosp_2.
    InterProi IPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    IPR028579. Thym_Pase_Put.
    IPR013466. Thymidine/AMP_Pase.
    [Graphical view ]
    PANTHERi PTHR10515. PTHR10515. 1 hit.
    Pfami PF02885. Glycos_trans_3N. 1 hit.
    PF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000478. TP_PyNP. 1 hit.
    SMARTi SM00941. PYNP_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsi TIGR02645. ARCH_P_rylase. 1 hit.
    PROSITEi PS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BNC1.

    Entry informationi

    Entry nameiTYPH_CHESB
    AccessioniPrimary (citable) accession number: Q11BH8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 15, 2008
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3