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Protein

16S rRNA (cytosine(967)-C(5))-methyltransferase

Gene

Tery_0744

Organism
Trichodesmium erythraeum (strain IMS101)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.SAAS annotation

Catalytic activityi

S-adenosyl-L-methionine + cytosine(967) in 16S rRNA = S-adenosyl-L-homocysteine + 5-methylcytosine(967) in 16S rRNA.SAAS annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei284S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei311S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei328S-adenosyl-L-methioninePROSITE-ProRule annotation1
Active sitei381NucleophilePROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMethyltransferasePROSITE-ProRule annotationSAAS annotation, RNA-bindingPROSITE-ProRule annotationSAAS annotation, Transferase
Biological processrRNA processingSAAS annotation
LigandS-adenosyl-L-methioninePROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciTERY203124:G1G6S-761-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
16S rRNA (cytosine(967)-C(5))-methyltransferaseSAAS annotation (EC:2.1.1.176SAAS annotation)
Gene namesi
Ordered Locus Names:Tery_0744Imported
OrganismiTrichodesmium erythraeum (strain IMS101)Imported
Taxonomic identifieri203124 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeOscillatorialesMicrocoleaceaeTrichodesmium
Proteomesi
  • UP000008878 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi203124.Tery_0744

Structurei

3D structure databases

ProteinModelPortaliQ118A0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini169 – 441SAM_MT_RSMB_NOPInterPro annotationAdd BLAST273

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni260 – 266S-adenosyl-L-methionine bindingPROSITE-ProRule annotation7

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili283 – 303Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.PROSITE-ProRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4105CYJ Bacteria
COG0144 LUCA
HOGENOMiHOG000037300
KOiK03500
OMAiLRVNRQH
OrthoDBiPOG091H02E2

Family and domain databases

Gene3Di1.10.940.10, 1 hit
InterProiView protein in InterPro
IPR001678 MeTrfase_RsmB/NOP2
IPR035926 NusB-like_sf
IPR006027 NusB_RsmB_TIM44
IPR023267 RCMT
IPR004573 rRNA_ssu_MeTfrase_B
IPR029063 SAM-dependent_MTases
PfamiView protein in Pfam
PF01189 Methyltr_RsmB-F, 1 hit
PF01029 NusB, 1 hit
PRINTSiPR02008 RCMTFAMILY
SUPFAMiSSF48013 SSF48013, 1 hit
SSF53335 SSF53335, 1 hit
TIGRFAMsiTIGR00563 rsmB, 1 hit
PROSITEiView protein in PROSITE
PS51686 SAM_MT_RSMB_NOP, 1 hit

Sequencei

Sequence statusi: Complete.

Q118A0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNNPRQLAF IILQEIYRKQ VFTDVALDRH LKKNDLIDAN RRLVTELVYG
60 70 80 90 100
CVRRQRSLDA IIDQLAKKKS PQQHPYLRII LHIGLYQLSY LEQIPESAAV
110 120 130 140 150
DTTVELAKQN KFAKLAGFVN GLLREYIRQN LTINLPENPV QKLGISYSFP
160 170 180 190 200
NWIVKYWIEE LGLTEAEKLC YWFNLSPSID LRINPLKTSV EEVEIAMKNI
210 220 230 240 250
GISVSRILQV PQALRLNGAV GQIQKLPGYN EGWWSIQDSS AQLVCYLLNP
260 270 280 290 300
QPGEIIIDAC AAPGGKTTHI GELMGDNGKI FAIDMTASRL KKLESNTERL
310 320 330 340 350
QLKSISISRG DSRNLTEFIN QADRVLLDVP CSGLGTLHRR ADARWRKTLE
360 370 380 390 400
NIGELAKLQG ELLENAAKWV KPGGVLVYAT CTIYPLENEG VIEKFLTNNY
410 420 430 440
EWEIEAPTVD FMVSPCREGW IKIWPHREQM DGFFMVKLRR KVI
Length:443
Mass (Da):50,513
Last modified:August 22, 2006 - v1
Checksum:iF7D602C310C51A39
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000393 Genomic DNA Translation: ABG50174.1
RefSeqiWP_011610567.1, NC_008312.1

Genome annotation databases

EnsemblBacteriaiABG50174; ABG50174; Tery_0744
KEGGiter:Tery_0744

Similar proteinsi

Entry informationi

Entry nameiQ118A0_TRIEI
AccessioniPrimary (citable) accession number: Q118A0
Entry historyiIntegrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: May 23, 2018
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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