Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q116J1 (Q116J1_TRIEI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Tery_1233 EMBL ABG50583.1
OrganismTrichodesmium erythraeum (strain IMS101) [Complete proteome] [HAMAP] EMBL ABG50583.1
Taxonomic identifier203124 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeOscillatorialesTrichodesmium

Protein attributes

Sequence length544 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABG50583.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

phosphoric diester hydrolase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q116J1 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 87FA8BDFA4266C91

FASTA54461,770
        10         20         30         40         50         60 
MIQLNTLKLF QELTETSELL IIEQLLDIGV ALSDTYNLGE LLNLILSKSR EITCSDAGSV 

        70         80         90        100        110        120 
YLVDEVNFKE RKLVFKVAQN DSIPELAFQE IALPIDFKSL TGYVALTGHT LNIPDAYNLP 

       130        140        150        160        170        180 
KDIPYKFDES FDEKTGYRTC SVLILPVQKQ NQEIIGVLQL INRKVQPDVV ITKENAKELT 

       190        200        210        220        230        240 
KAYSKWEQRI LISLASQAAI SIERNNLQEN IENLFEGFVK ASVQAIEARD SCTSGHSERV 

       250        260        270        280        290        300 
AKLTVGLCQE VNIITNGVFS GTYFSNEQIQ EMRYAALLHD FGKIGVPEGI LTKRKKLYQE 

       310        320        330        340        350        360 
QLELIKQRFS VAQRTLEMES AQTKYEYLLR HLSGTYQSHT QESCPLCQKI ENLDLELKTA 

       370        380        390        400        410        420 
ITQLNNYWQT ILIANEPKVL AEEPLKQLQQ ISLYTYKDTD GQIKPLITSE EMAQLTVPRG 

       430        440        450        460        470        480 
NLTPEERRAV EAHVTHSYEF LKQIAWTKNL QNIPEIAYGH HEKLDGSGYP RGLKKNEISL 

       490        500        510        520        530        540 
QTQIIVIADI YDALTAGDRP YKQGLPVEAA LRIMRSEAAE NKINSHFLEL FEQKQVFSIL 


GHSK 

« Hide

References

[1]"Complete sequence of Trichodesmium erythraeum IMS101."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IMS101 EMBL ABG50583.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000393 Genomic DNA. Translation: ABG50583.1.
RefSeqYP_721056.1. NC_008312.1.

3D structure databases

ProteinModelPortalQ116J1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING203124.Tery_1233.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG50583; ABG50583; Tery_1233.
GeneID4242160.
KEGGter:Tery_1233.
PATRIC23986219. VBITriEry99848_1547.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2206.
HOGENOMHOG000007244.
OMAGYRSKSM.
OrthoDBEOG686NCQ.
ProtClustDBCLSK572146.

Enzyme and pathway databases

BioCycTERY203124:GJDR-1241-MONOMER.

Family and domain databases

Gene3D1.10.3210.10. 2 hits.
InterProIPR003018. GAF.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
[Graphical view]
PfamPF01590. GAF. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
SMARTSM00065. GAF. 1 hit.
SM00471. HDc. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ116J1_TRIEI
AccessionPrimary (citable) accession number: Q116J1
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: April 16, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)