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Q115G1 (Q115G1_TRIEI) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length395 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU004247 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site571Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2881Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1561Substrate By similarity HAMAP-Rule MF_01201
Binding site3361Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue571N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
Q115G1 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 84547A7BC9ABD34A

FASTA39543,286
        10         20         30         40         50         60 
MLSREKTSFK TLALESDAYG GICQRAWVEI NDRALSYNVQ QLKSLLSAKT QLMGVVKADA 

        70         80         90        100        110        120 
YGHGASKISK TILEAGVDRL AVATLPEGIE LRLAGIKPPI LILGAIDRPE QIRAIAHWQL 

       130        140        150        160        170        180 
EPTICTPQQA LVFSETLSYQ TEPMLVHLKL DTGMSRLGTP WQQAVEFVKF VQGLPNLKIA 

       190        200        210        220        230        240 
SIYSHLATAD NLDQTVMKQQ HQRFEEAIGL CGIGGKSFSS DIQLHLANSA ATLTDPALHY 

       250        260        270        280        290        300 
DMVRVGLAIY GLYPAPHLQD KINLKPVMQV KARVTQVKTI EAGTGVSYGY QFIAPKQMRL 

       310        320        330        340        350        360 
AVVGIGYADG LPRNLSNRMK VIVRDRLIPQ VGAITMDQLM LDVSAIPDLE TGEVVTLLGQ 

       370        380        390 
VGKHQISAEN WANTLGTISW EILCGFKNRL PRVAV 

« Hide

References

[1]"Complete sequence of Trichodesmium erythraeum IMS101."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IMS101 EMBL ABG50863.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000393 Genomic DNA. Translation: ABG50863.1.
RefSeqYP_721336.1. NC_008312.1.

3D structure databases

ProteinModelPortalQ115G1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING203124.Tery_1583.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG50863; ABG50863; Tery_1583.
GeneID4242732.
KEGGter:Tery_1583.
PATRIC23987135. VBITriEry99848_2004.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAIYSHLAL.
OrthoDBEOG6PP9NJ.

Enzyme and pathway databases

BioCycTERY203124:GJDR-1592-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ115G1_TRIEI
AccessionPrimary (citable) accession number: Q115G1
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: July 9, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)