Q115G1 (Q115G1_TRIEI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

Tery_1583 EMBL ABG50863.1

Organism

Trichodesmium erythraeum (strain IMS101) [Complete proteome] [HAMAP] EMBL ABG50863.1

Taxonomic identifier

203124 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Oscillatoriales › Trichodesmium › Trichodesmium erythraeum

Protein attributes

Sequence length	395 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL ABG50863.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q115G1 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: 84547A7BC9ABD34A	FASTA	395	43,286
	10 20 30 40 50 60 MLSREKTSFK TLALESDAYG GICQRAWVEI NDRALSYNVQ QLKSLLSAKT QLMGVVKADA 70 80 90 100 110 120 YGHGASKISK TILEAGVDRL AVATLPEGIE LRLAGIKPPI LILGAIDRPE QIRAIAHWQL 130 140 150 160 170 180 EPTICTPQQA LVFSETLSYQ TEPMLVHLKL DTGMSRLGTP WQQAVEFVKF VQGLPNLKIA 190 200 210 220 230 240 SIYSHLATAD NLDQTVMKQQ HQRFEEAIGL CGIGGKSFSS DIQLHLANSA ATLTDPALHY 250 260 270 280 290 300 DMVRVGLAIY GLYPAPHLQD KINLKPVMQV KARVTQVKTI EAGTGVSYGY QFIAPKQMRL 310 320 330 340 350 360 AVVGIGYADG LPRNLSNRMK VIVRDRLIPQ VGAITMDQLM LDVSAIPDLE TGEVVTLLGQ 370 380 390 VGKHQISAEN WANTLGTISW EILCGFKNRL PRVAV

References

[1]

"Complete sequence of Trichodesmium erythraeum IMS101." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IMS101 EMBL ABG50863.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000393 Genomic DNA. Translation: ABG50863.1.
RefSeq	YP_721336.1. NC_008312.1.
3D structure databases
ProteinModelPortal	Q115G1.
ModBase	Search...
Protein-protein interaction databases
STRING	203124.Tery_1583.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABG50863; ABG50863; Tery_1583.
GeneID	4242732.
KEGG	ter:Tery_1583.
PATRIC	23987135. VBITriEry99848_2004.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031444.
KO	K01775.
OMA	PTLCNPQ.
ProtClustDB	PRK00053.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q115G1_TRIEI

Accession

Primary (citable) accession number: Q115G1

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	May 1, 2013
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)