Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q114I1

- GLGB_TRIEI

UniProt

Q114I1 - GLGB_TRIEI

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Trichodesmium erythraeum (strain IMS101)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei431 – 4311NucleophileUniRule annotation
Active sitei484 – 4841Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciTERY203124:GJDR-1849-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:Tery_1837
OrganismiTrichodesmium erythraeum (strain IMS101)
Taxonomic identifieri203124 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeOscillatorialesTrichodesmium
ProteomesiUP000008878: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7767761,4-alpha-glucan branching enzyme GlgBPRO_0000260713Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi203124.Tery_1837.

Structurei

3D structure databases

ProteinModelPortaliQ114I1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q114I1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTISADQVNQ IAWNHHHDPF QVLGSHQIEL SGKTMTVIRA YQPSAEAVSV
60 70 80 90 100
ISPIDRKEYP MQSVHNPHFF ECVINTPKLA NYQLKIKEGE HERVIHDPYA
110 120 130 140 150
FRSAKLTEFD LQLFGEGNHH RIYEKLGAHI TEVDGIKGVY FAVWAPNARN
160 170 180 190 200
VSILGNFNYW DGRKHQMRKG HTGVWELFIP DIGPGESYKY EVKNWEGHIY
210 220 230 240 250
EKSDPYGYQQ EVRPKTASIV VDLDSYTWND QEWMEKRRHT DPLTQPISVY
260 270 280 290 300
ECHFGSWIHA SAHEPAKLPN GETEPVVQVS ELRPDARFLT YRELADRLVS
310 320 330 340 350
YVKDLGYTHI EMLPVAEHPF DGSWGYQVTG FFAPTSRYGS AQDFMYFVDK
360 370 380 390 400
CHENGIGVIV DWVPGHFPKD GHGLAFFDGT HLYEHPDPRK GEHKQWGTLV
410 420 430 440 450
FDYGRNEVRN FLAANALFWF DKYHIDGVRV DAVASMVYHN YMRPDGEWVA
460 470 480 490 500
NKYGGVEYIE AADFLRQVNH LLFSYYPGVL SIAEESTSWP MVTWPTYVGG
510 520 530 540 550
LGFNFKWNMG WMHDMLDYFE MDPWFRQFHQ NNVTFSIWYH HTENYMLALS
560 570 580 590 600
HDEVVHCKSS ILGKMPGDNW QKFANVRALF AYMFTHPGKK TMFMGMELPQ
610 620 630 640 650
WGEWDVWGDL EWHLLEFDAH QGMKRFFRDL NHLYCSEPAL YEQDCNEGGF
660 670 680 690 700
EWIDCNDNNH SVVSFIRRAK DGKDFVVTVC NFTPQPHSHY RVGVPEPGFY
710 720 730 740 750
TEIFNSDAGN YGGSNMGNLG GKWTDDWFFH DYQQSLDLCL PPLGVVVFQL
760 770
DKKKTIAMIQ ESEDVETVEA KAKNAS
Length:776
Mass (Da):89,966
Last modified:August 22, 2006 - v1
Checksum:i4AB9D098AB205C07
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000393 Genomic DNA. Translation: ABG51093.1.
RefSeqiWP_011611468.1. NC_008312.1.
YP_721566.1. NC_008312.1.

Genome annotation databases

EnsemblBacteriaiABG51093; ABG51093; Tery_1837.
GeneIDi4241913.
KEGGiter:Tery_1837.
PATRICi23987785. VBITriEry99848_2328.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000393 Genomic DNA. Translation: ABG51093.1 .
RefSeqi WP_011611468.1. NC_008312.1.
YP_721566.1. NC_008312.1.

3D structure databases

ProteinModelPortali Q114I1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 203124.Tery_1837.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG51093 ; ABG51093 ; Tery_1837 .
GeneIDi 4241913.
KEGGi ter:Tery_1837.
PATRICi 23987785. VBITriEry99848_2328.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci TERY203124:GJDR-1849-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: IMS101.

Entry informationi

Entry nameiGLGB_TRIEI
AccessioniPrimary (citable) accession number: Q114I1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: August 22, 2006
Last modified: October 29, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3