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Q112U9 (Q112U9_TRIEI) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Asparagine--tRNA ligase HAMAP MF_00534
EC=6.1.1.22 HAMAP MF_00534
Alternative name(s):
Asparaginyl-tRNA synthetase HAMAP MF_00534
Gene names
Name:asnS HAMAP MF_00534
Ordered Locus Names:Tery_2246
OrganismTrichodesmium erythraeum (strain IMS101) [Complete proteome] [HAMAP] EMBL ABG51475.1
Taxonomic identifier203124 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Oscillatoriales › Trichodesmium

Protein attributes

Sequence length463 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn). HAMAP MF_00534

Subunit structure

Homodimer By similarity. HAMAP MF_00534

Subcellular location

Cytoplasm By similarity HAMAP MF_00534.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00534

Sequences

Sequence LengthMass (Da)Tools
Q112U9 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 71B5CC1127A5214E

FASTA46352,997
        10         20         30         40         50         60 
MTKQRIAKIL GSGQPDAKVT IQGWVRTKRE LKEFAFVEVN DGSCLANLQV VLNPDLPNYQ 

        70         80         90        100        110        120 
ESLQQMNTGA SVEMTGILVE SPAKGQRIEL KAESITAYGD ADPETYPLQK KRHSFEFLRT 

       130        140        150        160        170        180 
IAHLRGRTNT YGAVFRVRNT CANAIHQFFQ ERGFLWVHTP IITASDCEGA GEMFTVTNLD 

       190        200        210        220        230        240 
LKKIPLTEKQ DIDFSQDFFG KSAFLTVSGQ LEAEIMATAL SNVYTFGPTF RAENSNTSRH 

       250        260        270        280        290        300 
LAEFWMIEPE MAFCDLEGDM DLAEEFLKYI FKSVLEGCPE DMEFFNKRID KTVFETADTI 

       310        320        330        340        350        360 
INNSFERITY TEAVSLLEKA DKKFDYPVDW GLDLQSEHER YLCEELFKKP VIVTDYPAKI 

       370        380        390        400        410        420 
KAFYMRLNDD AKTVRAMDVL VPKVGEIIGG SQREERLDVL ERRIDEQEMN KEELWWYLDL 

       430        440        450        460 
RRYGTVPHAG FGLGFERVVQ FMTGMGNIRD VIPFPRAPLT VDF

« Hide

References

[1]"Complete sequence of Trichodesmium erythraeum IMS101."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IMS101.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000393 Genomic DNA. Translation: ABG51475.1.
RefSeqYP_721948.1. NC_008312.1.

3D structure databases

ProteinModelPortalQ112U9.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ112U9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4243339.
GenomeReviewsGene locus Tery_2246 in contig CP000393_GR.
KEGGter:Tery_2246.
NMPDRfig|203124.1.peg.1452.
PATRIC23988837. VBITriEry99848_2847.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0017.
HOGENOMHBG745843.
OMAAIHRFFH.
PhylomeDBQ112U9.
ProtClustDBPRK03932.

Enzyme and pathway databases

BioCycTERY203124:TERY_2246-MONOMER.

Family and domain databases

HAMAPMF_00534. Asn_tRNA_synth.
[Tree]
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-synth_IIb.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
IPR004365. NA-bd_OB_tRNA-helicase.
[Graphical view]
Gene3DG3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KOK01893.
PANTHERPTHR22594. aa-tRNA-synt_II. 1 hit.
PTHR22594:SF6. PTHR22594:SF6. 1 hit.
PfamPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti. 1 hit.
[Graphical view]
PRINTSPR01042. TRNASYNTHASP.
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00457. AsnS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ112U9_TRIEI
AccessionPrimary (citable) accession number: Q112U9
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: January 25, 2012
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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