Q10XW9 (SYGA_TRIEI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glycine--tRNA ligase alpha subunit
EC=6.1.1.14

Alternative name(s):
Glycyl-tRNA synthetase alpha subunit
Short name=GlyRS

Gene names

Name:	glyQ
Ordered Locus Names:	Tery_3866

Organism

Trichodesmium erythraeum (strain IMS101) [Complete proteome] [HAMAP]

Taxonomic identifier

203124 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Oscillatoriales › Trichodesmium

Protein attributes

Sequence length	294 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254
Subunit structure	Tetramer of two alpha and two beta subunits By similarity.
Subcellular location	Cytoplasm HAMAP MF_00254.
Sequence similarities	Belongs to the class-II aminoacyl-tRNA synthetase family.

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm
Ligand	ATP-binding Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW glycine-tRNA ligase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 294	294	Glycine--tRNA ligase alpha subunit HAMAP MF_00254		PRO_1000047525

Sequences

	Sequence		Length	Mass (Da)
	Q10XW9 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: 51DA21DF55E21BDE	FASTA	294	34,080
	10 20 30 40 50 60 MNFQSVIATL NQFWSDRGCL IAQSYDTEKG AGTMNPHTFL RAIGPEPWSV AYVEPCRRPT 70 80 90 100 110 120 DGRYGENPNR FQHYYQYQVL MKPSPNNIQD LYLDSLRALG IRPEDHDIRF VEDNWESPTL 130 140 150 160 170 180 GAWGVGWEVW LDGMEITQFT YFQQCGSIDC RPVSIEITYG LERLAMYLQE VDAITKIAWT 190 200 210 220 230 240 DNITYGDVYL QGEIEQCSYN FEASSPDFLF NLFGLYEQEA KQLIKRELVL PSLDYVLKCS 250 260 270 280 290 HSFNLLDARG VISVTERTRY IGRIRNLARQ VGQLYLQQRE KLNFPLLKET MEAA

References

[1]

"Complete sequence of Trichodesmium erythraeum IMS101." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Kiss H., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IMS101.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000393 Genomic DNA. Translation: ABG52905.1.
RefSeq	YP_723378.1. NC_008312.1.
3D structure databases
ProteinModelPortal	Q10XW9.
SMR	Q10XW9. Positions 1-281.
ModBase	Search...
Protein-protein interaction databases
STRING	Q10XW9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4243529.
GenomeReviews	Gene locus Tery_3866 in contig CP000393_GR.
KEGG	ter:Tery_3866.
NMPDR	fig|203124.1.peg.4983.
PATRIC	23993023. VBITriEry99848_4919.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0752.
HOGENOM	HBG285316.
OMA	CRRPTDG.
PhylomeDB	Q10XW9.
ProtClustDB	PRK09348.
Enzyme and pathway databases
BioCyc	TERY203124:TERY_3866-MONOMER.
Family and domain databases
HAMAP	MF_00254. Gly_tRNA_synth_alpha. [Tree]
InterPro	IPR006194. Gly-tRNA-synth_II_heterodimer. IPR002310. Gly-tRNA_synth_IIc_asu. [Graphical view]
KO	K01878.
Pfam	PF02091. tRNA-synt_2e. 1 hit. [Graphical view]
PRINTS	PR01044. TRNASYNTHGA.
TIGRFAMs	TIGR00388. GlyQ. 1 hit.
PROSITE	PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

SYGA_TRIEI

Accession

Primary (citable) accession number: Q10XW9

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	August 22, 2006
Last modified:	January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program