Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q10UU4

- Q10UU4_TRIEI

UniProt

Q10UU4 - Q10UU4_TRIEI

Protein

Protein translocase subunit SecD

Gene

secD

Organism
Trichodesmium erythraeum (strain IMS101)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (22 Aug 2006)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.UniRule annotation
    Probably participates in protein translocation into and across both the cytoplasmic and thylakoid membranes in cyanobacterial cells.UniRule annotation

    GO - Molecular functioni

    1. P-P-bond-hydrolysis-driven protein transmembrane transporter activity Source: InterPro

    GO - Biological processi

    1. intracellular protein transmembrane transport Source: UniProtKB-HAMAP
    2. protein targeting Source: UniProtKB-HAMAP
    3. protein transport by the Sec complex Source: UniProtKB-HAMAP

    Keywords - Biological processi

    Protein transport, TranslocationUniRule annotationSAAS annotation, Transport

    Enzyme and pathway databases

    BioCyciTERY203124:GJDR-5125-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein translocase subunit SecDUniRule annotation
    Gene namesi
    Name:secDUniRule annotation
    Ordered Locus Names:Tery_5077Imported
    OrganismiTrichodesmium erythraeum (strain IMS101)Imported
    Taxonomic identifieri203124 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeOscillatorialesTrichodesmium
    ProteomesiUP000008878: Chromosome

    Subcellular locationi

    Cell inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. intracellular Source: GOC
    3. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell inner membraneUniRule annotation, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2424 PotentialImportedAdd
    BLAST
    Chaini25 – 461437 PotentialImportedPRO_5000127144Add
    BLAST

    Interactioni

    Subunit structurei

    Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved.UniRule annotation

    Protein-protein interaction databases

    STRINGi203124.Tery_5077.

    Structurei

    3D structure databases

    ProteinModelPortaliQ10UU4.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei7 – 2721Helical;UniRule annotationAdd
    BLAST
    Transmembranei299 – 31921Helical;UniRule annotationAdd
    BLAST
    Transmembranei322 – 34221Helical;UniRule annotationAdd
    BLAST
    Transmembranei345 – 36521Helical;UniRule annotationAdd
    BLAST
    Transmembranei386 – 40823Helical;UniRule annotationAdd
    BLAST
    Transmembranei418 – 44023Helical;UniRule annotationAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the SecD/SecF family. SecD subfamily.UniRule annotation

    Keywords - Domaini

    SignalImported, Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

    Phylogenomic databases

    eggNOGiCOG0342.
    HOGENOMiHOG000018636.
    KOiK03072.
    OMAiDAIYRIM.
    OrthoDBiEOG6N0HJT.

    Family and domain databases

    HAMAPiMF_01463_B. SecD_B.
    InterProiIPR001036. Acrflvin-R.
    IPR005791. SecD.
    IPR022813. SecD/SecF_arch_bac.
    IPR022645. SecD/SecF_bac.
    IPR022646. SecD/SecF_CS.
    [Graphical view]
    PfamiPF07549. Sec_GG. 1 hit.
    PF02355. SecD_SecF. 1 hit.
    [Graphical view]
    PRINTSiPR00702. ACRIFLAVINRP.
    TIGRFAMsiTIGR00916. 2A0604s01. 1 hit.
    TIGR01129. secD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q10UU4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRRQNSYIAL ILVLVIASVT VLSQIPIRLG LDLRGGSQLT IQLQTSEEIP    50
    TIDERVMEGV LKIVENRVNA LGVSESVVQS LGQDQILVQL PGVNDPEQAE 100
    RVLGGTAQLD FREQLQSTEQ QLAIEYQVQR QLLVEQELLK NSEDQEAIEK 150
    NLESIEKTNQ AIAQLFKEAI IKGQDLRDAL AEPEAPGSNN WNVALRFTSE 200
    GGQKFAELTK NLAGTGRSIG IFLDDKLLSA PTVSVEFAET GITGGSAVIQ 250
    GTFTPQQAND LAVQLRGGAL PVSVEIVENR TVGATLGRDS IQRSVYAGIG 300
    GLILVLIFMV LYYRLPGVIA DVALVIYALF TIASFSILGV TLTLPGIAGF 350
    ILSIGMAVDA NVLIFERTRE ELRAGKTLYR SVESGFYRAF SSILDGNVTT 400
    LIACVALFWL GTGLVKGFAL TLGIGVAISM FTALTCSRTL MFWTIGFSQF 450
    RKPELFCPEL K 461
    Length:461
    Mass (Da):50,044
    Last modified:August 22, 2006 - v1
    Checksum:i4DF4B03242DFCC12
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000393 Genomic DNA. Translation: ABG53980.1.
    RefSeqiWP_011614273.1. NC_008312.1.
    YP_724453.1. NC_008312.1.

    Genome annotation databases

    EnsemblBacteriaiABG53980; ABG53980; Tery_5077.
    GeneIDi4246732.
    KEGGiter:Tery_5077.
    PATRICi23996200. VBITriEry99848_6501.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000393 Genomic DNA. Translation: ABG53980.1 .
    RefSeqi WP_011614273.1. NC_008312.1.
    YP_724453.1. NC_008312.1.

    3D structure databases

    ProteinModelPortali Q10UU4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 203124.Tery_5077.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABG53980 ; ABG53980 ; Tery_5077 .
    GeneIDi 4246732.
    KEGGi ter:Tery_5077.
    PATRICi 23996200. VBITriEry99848_6501.

    Phylogenomic databases

    eggNOGi COG0342.
    HOGENOMi HOG000018636.
    KOi K03072.
    OMAi DAIYRIM.
    OrthoDBi EOG6N0HJT.

    Enzyme and pathway databases

    BioCyci TERY203124:GJDR-5125-MONOMER.

    Family and domain databases

    HAMAPi MF_01463_B. SecD_B.
    InterProi IPR001036. Acrflvin-R.
    IPR005791. SecD.
    IPR022813. SecD/SecF_arch_bac.
    IPR022645. SecD/SecF_bac.
    IPR022646. SecD/SecF_CS.
    [Graphical view ]
    Pfami PF07549. Sec_GG. 1 hit.
    PF02355. SecD_SecF. 1 hit.
    [Graphical view ]
    PRINTSi PR00702. ACRIFLAVINRP.
    TIGRFAMsi TIGR00916. 2A0604s01. 1 hit.
    TIGR01129. secD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: IMS101Imported.

    Entry informationi

    Entry nameiQ10UU4_TRIEI
    AccessioniPrimary (citable) accession number: Q10UU4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 22, 2006
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3