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Q10UU4

- Q10UU4_TRIEI

UniProt

Q10UU4 - Q10UU4_TRIEI

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Protein
Protein translocase subunit SecD
Gene
secD, Tery_5077
Organism
Trichodesmium erythraeum (strain IMS101)
Status
Unreviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA By similarity.UniRule annotation
Probably participates in protein translocation into and across both the cytoplasmic and thylakoid membranes in cyanobacterial cells By similarity.UniRule annotation

GO - Molecular functioni

  1. P-P-bond-hydrolysis-driven protein transmembrane transporter activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. intracellular protein transmembrane transport Source: UniProtKB-HAMAP
  2. protein targeting Source: UniProtKB-HAMAP
  3. protein transport by the Sec complex Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Biological processi

Protein transport, TranslocationUniRule annotationSAAS annotations, Transport

Enzyme and pathway databases

BioCyciTERY203124:GJDR-5125-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein translocase subunit SecDUniRule annotation
Gene namesi
Name:secDUniRule annotation
Ordered Locus Names:Tery_5077Imported
OrganismiTrichodesmium erythraeum (strain IMS101)Imported
Taxonomic identifieri203124 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeOscillatorialesTrichodesmium
ProteomesiUP000008878: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei7 – 2721Helical; By similarityUniRule annotation
Add
BLAST
Transmembranei299 – 31921Helical; By similarityUniRule annotation
Add
BLAST
Transmembranei322 – 34221Helical; By similarityUniRule annotation
Add
BLAST
Transmembranei345 – 36521Helical; By similarityUniRule annotation
Add
BLAST
Transmembranei386 – 40823Helical; By similarityUniRule annotation
Add
BLAST
Transmembranei418 – 44023Helical; By similarityUniRule annotation
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. intracellular Source: GOC
  3. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membraneUniRule annotation, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424 PredictedImported
Add
BLAST
Chaini25 – 461437 PredictedImported
PRO_5000127144Add
BLAST

Interactioni

Subunit structurei

Forms a complex with SecF. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF. Other proteins may also be involved By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi203124.Tery_5077.

Structurei

3D structure databases

ProteinModelPortaliQ10UU4.

Family & Domainsi

Sequence similaritiesi

Belongs to the SecD/SecF family. SecD subfamily.UniRule annotation

Keywords - Domaini

SignalImported, Transmembrane, Transmembrane helixUniRule annotationSAAS annotations

Phylogenomic databases

eggNOGiCOG0342.
HOGENOMiHOG000018636.
KOiK03072.
OMAiDAIYRIM.
OrthoDBiEOG6N0HJT.

Family and domain databases

HAMAPiMF_01463_B. SecD_B.
InterProiIPR001036. Acrflvin-R.
IPR005791. SecD.
IPR022813. SecD/SecF_arch_bac.
IPR022645. SecD/SecF_bac.
IPR022646. SecD/SecF_CS.
[Graphical view]
PfamiPF07549. Sec_GG. 1 hit.
PF02355. SecD_SecF. 1 hit.
[Graphical view]
PRINTSiPR00702. ACRIFLAVINRP.
TIGRFAMsiTIGR00916. 2A0604s01. 1 hit.
TIGR01129. secD. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q10UU4-1 [UniParc]FASTAAdd to Basket

« Hide

MRRQNSYIAL ILVLVIASVT VLSQIPIRLG LDLRGGSQLT IQLQTSEEIP    50
TIDERVMEGV LKIVENRVNA LGVSESVVQS LGQDQILVQL PGVNDPEQAE 100
RVLGGTAQLD FREQLQSTEQ QLAIEYQVQR QLLVEQELLK NSEDQEAIEK 150
NLESIEKTNQ AIAQLFKEAI IKGQDLRDAL AEPEAPGSNN WNVALRFTSE 200
GGQKFAELTK NLAGTGRSIG IFLDDKLLSA PTVSVEFAET GITGGSAVIQ 250
GTFTPQQAND LAVQLRGGAL PVSVEIVENR TVGATLGRDS IQRSVYAGIG 300
GLILVLIFMV LYYRLPGVIA DVALVIYALF TIASFSILGV TLTLPGIAGF 350
ILSIGMAVDA NVLIFERTRE ELRAGKTLYR SVESGFYRAF SSILDGNVTT 400
LIACVALFWL GTGLVKGFAL TLGIGVAISM FTALTCSRTL MFWTIGFSQF 450
RKPELFCPEL K 461
Length:461
Mass (Da):50,044
Last modified:August 22, 2006 - v1
Checksum:i4DF4B03242DFCC12
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000393 Genomic DNA. Translation: ABG53980.1.
RefSeqiWP_011614273.1. NC_008312.1.
YP_724453.1. NC_008312.1.

Genome annotation databases

EnsemblBacteriaiABG53980; ABG53980; Tery_5077.
GeneIDi4246732.
KEGGiter:Tery_5077.
PATRICi23996200. VBITriEry99848_6501.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000393 Genomic DNA. Translation: ABG53980.1 .
RefSeqi WP_011614273.1. NC_008312.1.
YP_724453.1. NC_008312.1.

3D structure databases

ProteinModelPortali Q10UU4.
ModBasei Search...

Protein-protein interaction databases

STRINGi 203124.Tery_5077.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG53980 ; ABG53980 ; Tery_5077 .
GeneIDi 4246732.
KEGGi ter:Tery_5077.
PATRICi 23996200. VBITriEry99848_6501.

Phylogenomic databases

eggNOGi COG0342.
HOGENOMi HOG000018636.
KOi K03072.
OMAi DAIYRIM.
OrthoDBi EOG6N0HJT.

Enzyme and pathway databases

BioCyci TERY203124:GJDR-5125-MONOMER.

Family and domain databases

HAMAPi MF_01463_B. SecD_B.
InterProi IPR001036. Acrflvin-R.
IPR005791. SecD.
IPR022813. SecD/SecF_arch_bac.
IPR022645. SecD/SecF_bac.
IPR022646. SecD/SecF_CS.
[Graphical view ]
Pfami PF07549. Sec_GG. 1 hit.
PF02355. SecD_SecF. 1 hit.
[Graphical view ]
PRINTSi PR00702. ACRIFLAVINRP.
TIGRFAMsi TIGR00916. 2A0604s01. 1 hit.
TIGR01129. secD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: IMS101Imported.

Entry informationi

Entry nameiQ10UU4_TRIEI
AccessioniPrimary (citable) accession number: Q10UU4
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: September 3, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi