Reviewed,
UniProtKB/Swiss-Prot Q10S58 (SAT2_ORYSJ)
Last modified
September 22, 2009.
Version 24.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Probable serine acetyltransferase 2 EC=2.3.1.30 Alternative name(s): OsSERAT3;1 | ||||||
| Gene names |
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| Organism | Oryza sativa subsp. japonica (Rice) | ||||||
| Taxonomic identifier | 39947 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 354 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Catalytic activity | Acetyl-CoA + L-serine = CoA + O-acetyl-L-serine. |
| Pathway | Amino-acid biosynthesis; L-cysteine biosynthesis; L-cysteine from L-serine: step 1/2. |
| Subunit structure | Homomultimer By similarity. |
| Sequence similarities | Belongs to the transferase hexapeptide repeat family. |
| Sequence caution | The sequence AAN05506.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis |
| Coding sequence diversity | Alternative splicing |
| Molecular function | Acyltransferase Transferase |
| Gene Ontology (GO) | |
| Biological process | cysteine biosynthetic process from serine Inferred from electronic annotation. Source: InterPro |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: InterPro |
| Molecular function | serine O-acetyltransferase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q10S58-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q10S58-2) The sequence of this isoform differs from the canonical sequence as follows: 305-326: SMAVGNPAKVVGYKDKEDPSLT → REQNQGRRAGRGGRGDNMIMIK 327-354: Missing. | ||||||
| Note: Derived from EST data. No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 354 | 354 | Probable serine acetyltransferase 2 | PRO_0000363659 | |||||
Regions | |||||||||
| Compositional bias | 30 – 39 | 10 | Poly-Gly | ||||||
Natural variations | |||||||||
| Alternative sequence | 305 – 326 | 22 | SMAVG…DPSLT → REQNQGRRAGRGGRGDNMIM IK in isoform 2. | VSP_036319 | |||||
| Alternative sequence | 327 – 354 | 28 | Missing in isoform 2. | VSP_036320 | |||||
Experimental info | |||||||||
| Sequence conflict | 347 | 1 | K → R in AK067089. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species." The rice chromosome 3 sequencing consortium Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S. Jackson S.Genome Res. 15:1284-1291(2005) [PubMed: 16109971] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [2] | "The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [3] | "Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana." The rice annotation project (RAP) Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare. |
| [4] | "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice." The rice full-length cDNA consortium Science 301:376-379(2003) [PubMed: 12869764] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Strain: cv. Nipponbare. |
Cross-references
Sequence databases | |
|---|---|
| AC099399 Genomic DNA. Translation: AAN05506.1. Sequence problems. DP000009 Genomic DNA. Translation: ABF93836.1. DP000009 Genomic DNA. Translation: ABF93837.1. AP008209 Genomic DNA. Translation: BAF10793.1. AK067089 mRNA. No translation available. | |
| RefSeq | NP_001048879.1. |
| UniGene | Os.17315 |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 4331528. |
| GenomeReviews | Gene locus SAT2 in contig AP008209_GR. |
| KEGG | osa:4331528. |
Organism-specific databases | |
| Gramene | Q8H8D0. |
Family and domain databases | |
| InterPro | IPR001451. Hexapep_transf. IPR018357. Hexapep_transf_CS. IPR010493. Ser_AcTrfase_N. IPR005881. Ser_O-AcTrfase. [Graphical view] |
| Pfam | PF00132. Hexapep. 3 hits. PF06426. SATase_N. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR01172. cysE. 1 hit. |
| PROSITE | PS00101. HEXAPEP_TRANSFERASES. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | SAT2_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q10S58 Secondary accession number(s): Q10S57, Q8H8D0 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Oryza sativa (rice) Index of Oryza sativa entries and their corresponding gene designations |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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