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Reviewed, UniProtKB/Swiss-Prot Q10S58 (SAT2_ORYSJ)

Last modified September 22, 2009. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Probable serine acetyltransferase 2
    EC=2.3.1.30
Alternative name(s):
    OsSERAT3;1
Gene names
Name: SAT2
Ordered Locus Names: Os03g0133900, LOC_Os03g04140
ORF Names: OJ1006F06.16
OrganismOryza sativa subsp. japonica (Rice)
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length354 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Catalytic activity

Acetyl-CoA + L-serine = CoA + O-acetyl-L-serine.

Pathway

Amino-acid biosynthesis; L-cysteine biosynthesis; L-cysteine from L-serine: step 1/2.

Subunit structure

Homomultimer By similarity.

Sequence similarities

Belongs to the transferase hexapeptide repeat family.

Sequence caution

The sequence AAN05506.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Biological processAmino-acid biosynthesis
   Coding sequence diversityAlternative splicing
   Molecular functionAcyltransferase
Transferase
Gene Ontology (GO)
   Biological processcysteine biosynthetic process from serine

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functionserine O-acetyltransferase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Alternative products

This entry describes 2 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q10S58-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 (identifier: Q10S58-2)

The sequence of this isoform differs from the canonical sequence as follows:
     305-326: SMAVGNPAKVVGYKDKEDPSLT → REQNQGRRAGRGGRGDNMIMIK
     327-354: Missing.
Note: Derived from EST data. No experimental confirmation available.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 354354Probable serine acetyltransferase 2
PRO_0000363659

Regions

Compositional bias30 – 3910Poly-Gly

Natural variations

Alternative sequence305 – 32622SMAVG…DPSLT → REQNQGRRAGRGGRGDNMIM IK in isoform 2.
VSP_036319
Alternative sequence327 – 35428Missing in isoform 2.
VSP_036320

Experimental info

Sequence conflict3471K → R in AK067089. Ref.4

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 64C4029A13CE6FB5

FASTA35437,517
        10         20         30         40         50         60 
MTSCGCLVLE KVEDHGGEAA GRGRGRLAQG GGGGGGGCGS CAGEWRSRSE TMFPIYVMGS 

        70         80         90        100        110        120 
SRASSAAAAR GIVDAAGDPI WEAVKSEAKS EAEKEPILSS FLYASVLSHD CLERALSFVL 

       130        140        150        160        170        180 
ANRLEDPTLL ATQLIDIFND VMMNNKDIRR SIRLDAQAFK DRDPACAQYS WALLYLKGYH 

       190        200        210        220        230        240 
SVQSYRIAHV LWNQGRKVLA LALQSRISEV FAVDIHPAAR IGEGILLDHG TGLVIGETAI 

       250        260        270        280        290        300 
VGNWVSLMQG VTLGGTGKEN GDRHPKIGQG ALLGAGATIL GNINVGEGAM IAAGSLVLKD 

       310        320        330        340        350 
VPPHSMAVGN PAKVVGYKDK EDPSLTMKHD ARRDYFEHVA VSFSDDKANG SVVK 

« Hide

Isoform 2.

Checksum: AE85DA31E5741179
Show »

FASTA32634,519

References

« Hide 'large scale' references
[1]"Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
The rice chromosome 3 sequencing consortium
Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S. expand/collapse author list , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
Genome Res. 15:1284-1291(2005) [PubMed: 16109971] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed: 16100779] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana."
The rice annotation project (RAP)
Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed: 12869764] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
Strain: cv. Nipponbare.

Cross-references

Sequence databases

AC099399 Genomic DNA. Translation: AAN05506.1. Sequence problems.
DP000009 Genomic DNA. Translation: ABF93836.1.
DP000009 Genomic DNA. Translation: ABF93837.1.
AP008209 Genomic DNA. Translation: BAF10793.1.
AK067089 mRNA. No translation available.
RefSeqNP_001048879.1.
UniGeneOs.17315

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4331528.
GenomeReviewsGene locus SAT2 in contig AP008209_GR.
KEGGosa:4331528.

Organism-specific databases

GrameneQ8H8D0.

Family and domain databases

InterProIPR001451. Hexapep_transf.
IPR018357. Hexapep_transf_CS.
IPR010493. Ser_AcTrfase_N.
IPR005881. Ser_O-AcTrfase.
[Graphical view]
PfamPF00132. Hexapep. 3 hits.
PF06426. SATase_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR01172. cysE. 1 hit.
PROSITEPS00101. HEXAPEP_TRANSFERASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSAT2_ORYSJ
AccessionPrimary (citable) accession number: Q10S58
Secondary accession number(s): Q10S57, Q8H8D0
Entry history
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: August 22, 2006
Last modified: September 22, 2009
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

Relevant documents

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents