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Q10S32

- P2C28_ORYSJ

UniProt

Q10S32 - P2C28_ORYSJ

Protein

Probable protein phosphatase 2C 28

Gene

Os03g0137200

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (22 Aug 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    [a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

    Cofactori

    Binds 2 magnesium or manganese ions per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi87 – 871Manganese 1By similarity
    Metal bindingi87 – 871Manganese 2By similarity
    Metal bindingi88 – 881Manganese 1; via carbonyl oxygenBy similarity
    Metal bindingi288 – 2881Manganese 2By similarity
    Metal bindingi347 – 3471Manganese 2By similarity

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein serine/threonine phosphatase activity Source: InterPro

    GO - Biological processi

    1. protein dephosphorylation Source: InterPro

    Keywords - Molecular functioni

    Hydrolase, Protein phosphatase

    Keywords - Ligandi

    Magnesium, Manganese, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable protein phosphatase 2C 28 (EC:3.1.3.16)
    Short name:
    OsPP2C28
    Gene namesi
    Ordered Locus Names:Os03g0137200, LOC_Os03g04430
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 3

    Organism-specific databases

    GrameneiQ10S32.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 399399Probable protein phosphatase 2C 28PRO_0000363274Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os03g04430.1.

    Structurei

    3D structure databases

    ProteinModelPortaliQ10S32.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini50 – 328279PP2C-likeAdd
    BLAST

    Sequence similaritiesi

    Belongs to the PP2C family.Curated
    Contains 1 PP2C-like domain.Curated

    Phylogenomic databases

    eggNOGiCOG0631.
    HOGENOMiHOG000238703.
    OMAiARFINDH.

    Family and domain databases

    Gene3Di3.60.40.10. 1 hit.
    InterProiIPR001932. PP2C-like_dom.
    IPR000222. PP2C_Mn2_Asp60_BS.
    IPR015655. Protein_Pase_2C.
    [Graphical view]
    PANTHERiPTHR13832. PTHR13832. 1 hit.
    PfamiPF00481. PP2C. 1 hit.
    [Graphical view]
    SMARTiSM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view]
    SUPFAMiSSF81606. SSF81606. 1 hit.
    PROSITEiPS01032. PP2C. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q10S32-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLAAVMDYFR SCWGPRSPAG HRVRGSDVAG RQDGLLWYKD AGQLVTGEFS    50
    MAVVQANNLL EDQSQVESGA LSMAEPGPQG TFIGVYDGHG GPETARFIND 100
    HMFHHLRRFA TEHKCMSTDV IRKAFQATEE GFLSLVSKQW SLKPQIAAVG 150
    SCCLVGVICS GTLYVANLGD SRAVLGRFVK STGEVVATQL SSEHNACYEE 200
    VRQELQASHP DDPQIVVLKH NVWRVKGLIQ ISRSIGDVYL KRPEYNREPL 250
    HSKFRLRETF KRPILSSEPA IAVHQIQPND HFVIFASDGL WEHLSNQEAV 300
    DLVQNNPRNG IARRLVKVAM QEAAKKREMR YSDLKKIDRG VRRHFHDDIT 350
    VIVVFLDSNA ISKANWSRGP SVSLRGGGVT LPANSLAPFS TPTVLSSTY 399
    Length:399
    Mass (Da):44,289
    Last modified:August 22, 2006 - v1
    Checksum:iC1DB74AAAE80BA25
    GO

    Sequence cautioni

    The sequence AK065303 differs from that shown. Reason: Frameshift at position 177.
    The sequence ABF93864.1 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence ABF93865.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DP000009 Genomic DNA. Translation: ABF93863.1.
    DP000009 Genomic DNA. Translation: ABF93864.1. Sequence problems.
    DP000009 Genomic DNA. Translation: ABF93865.1. Sequence problems.
    AP008209 Genomic DNA. Translation: BAF10813.1.
    AK065303 mRNA. No translation available.
    RefSeqiNP_001048899.1. NM_001055434.1.
    UniGeneiOs.14914.

    Genome annotation databases

    EnsemblPlantsiOS03T0137200-01; OS03T0137200-01; OS03G0137200.
    GeneIDi4331548.
    KEGGiosa:4331548.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DP000009 Genomic DNA. Translation: ABF93863.1 .
    DP000009 Genomic DNA. Translation: ABF93864.1 . Sequence problems.
    DP000009 Genomic DNA. Translation: ABF93865.1 . Sequence problems.
    AP008209 Genomic DNA. Translation: BAF10813.1 .
    AK065303 mRNA. No translation available.
    RefSeqi NP_001048899.1. NM_001055434.1.
    UniGenei Os.14914.

    3D structure databases

    ProteinModelPortali Q10S32.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os03g04430.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS03T0137200-01 ; OS03T0137200-01 ; OS03G0137200 .
    GeneIDi 4331548.
    KEGGi osa:4331548.

    Organism-specific databases

    Gramenei Q10S32.

    Phylogenomic databases

    eggNOGi COG0631.
    HOGENOMi HOG000238703.
    OMAi ARFINDH.

    Family and domain databases

    Gene3Di 3.60.40.10. 1 hit.
    InterProi IPR001932. PP2C-like_dom.
    IPR000222. PP2C_Mn2_Asp60_BS.
    IPR015655. Protein_Pase_2C.
    [Graphical view ]
    PANTHERi PTHR13832. PTHR13832. 1 hit.
    Pfami PF00481. PP2C. 1 hit.
    [Graphical view ]
    SMARTi SM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81606. SSF81606. 1 hit.
    PROSITEi PS01032. PP2C. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
      The rice chromosome 3 sequencing consortium
      Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.
      , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
      Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    5. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
      Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
      BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiP2C28_ORYSJ
    AccessioniPrimary (citable) accession number: Q10S32
    Secondary accession number(s): Q10S30, Q10S31
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 10, 2009
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3