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Q10QL5

- BIP2C_ORYSJ

UniProt

Q10QL5 - BIP2C_ORYSJ

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Protein
Probable protein phosphatase 2C BIPP2C1
Gene
BIPP2C1, Os03g0192500, LOC_Os03g09220
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

May play a role in responses to biotic and abiotic stresses By similarity.

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Binds 2 magnesium or manganese ions per subunit By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi358 – 3581Manganese 1 By similarity
Metal bindingi358 – 3581Manganese 2 By similarity
Metal bindingi359 – 3591Manganese 1; via carbonyl oxygen By similarity
Metal bindingi488 – 4881Manganese 2 By similarity
Metal bindingi555 – 5551Manganese 2 By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. phosphoprotein phosphatase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C BIPP2C1 (EC:3.1.3.16)
Alternative name(s):
BTH-induced protein phosphatase 2C 1
Short name:
OsBIPP2C1
Gene namesi
Name:BIPP2C1
Ordered Locus Names:Os03g0192500, LOC_Os03g09220
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 3

Organism-specific databases

GrameneiQ10QL5.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 569569Probable protein phosphatase 2C BIPP2C1
PRO_0000363327Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ10QL5.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini327 – 564238PP2C-like
Add
BLAST

Sequence similaritiesi

Belongs to the PP2C family.
Contains 1 PP2C-like domain.

Phylogenomic databases

eggNOGiCOG0631.
OMAiHASNIGD.

Family and domain databases

Gene3Di3.60.40.10. 2 hits.
InterProiIPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.

Sequences (4)i

Sequence statusi: Complete.

This entry describes 4 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q10QL5-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MDEEARAAGC SPAPPRAPAA SCGAAAELCL CSPTGVEGIE QVPGCPCFED    50
AGAVVVSGEA PEGPGVLCSE DGAELKLAEQ GALDVRLGSP AVGIHEQQLL 100
HRGTSGSDEA GAINEISPVE VSPSEASSNL DTAGAIGGSP LMLESLPETS 150
DTRGCEQEVM PGVVVGSSNR DASSEVGVES ERGSDADGRN GLGEGELVSS 200
VDGGGAEKSS KVTGVLSEEG VDGMETALEP CVASVGSITQ VEEGVDRMET 250
SLDDSEASDG STTQDFDTDV ETESSGSSIE EQDMGYGVHI PHTEQAICEV 300
ARGNKSSEVK SSDRMSSVTL PTLILASGAA MLPHPSKVLT GGEDAYFIAC 350
DGWFGVADGV GQWSFEGINA GLYARELMDG CKKAVMESQG APEMRTEEVL 400
AKAADEARSP GSSTVLVAHF DGQVLHACNI GDSGFLVIRN GEIYQKSKPM 450
TYGFNFPLQI EKGDDPFKLV QKYTIDLQEG DAIVTATDGL FDNVYEEEIA 500
AVISKSLEAG LKPSEIAEFL VARAKEVGRS ATCRSPFSDA ALAVGYLGYS 550
GGKLDDVTVV VSVVRKSEV 569
Length:569
Mass (Da):58,800
Last modified:August 22, 2006 - v1
Checksum:i5ACFAA6EB5E5254E
GO
Isoform 2 (identifier: Q10QL5-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-36: MDEEARAAGC...ELCLCSPTGV → MKRRAPPDAP...LVWFGVGLDA

Note: Derived from EST data. No experimental confirmation available.

Show »
Length:598
Mass (Da):62,490
Checksum:i19BF1BFCE7F33A60
GO
Isoform 3 (identifier: Q10QL5-3) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     35-36: Missing.

Note: Derived from EST data. May be due to a competing donor splice site. No experimental confirmation available.

Show »
Length:567
Mass (Da):58,644
Checksum:iD7A97971D46CBF73
GO
Isoform 4 (identifier: Q10QL5-4) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     121-256: Missing.

Note: Derived from EST data. No experimental confirmation available.

Show »
Length:433
Mass (Da):45,179
Checksum:iF5C3792963532A86
GO

Sequence cautioni

The sequence ABF94414.1 differs from that shown. Reason: Erroneous gene model prediction.

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 3636MDEEA…SPTGV → MKRRAPPDAPQRRPARRLLP VALPPSSASAPLQVWVRGIH ACLISFGFGSRFDLVLVWFG VGLDA in isoform 2.
VSP_036286Add
BLAST
Alternative sequencei35 – 362Missing in isoform 3.
VSP_036287
Alternative sequencei121 – 256136Missing in isoform 4.
VSP_036288Add
BLAST

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DP000009 Genomic DNA. Translation: ABF94412.1.
DP000009 Genomic DNA. Translation: ABF94413.1.
DP000009 Genomic DNA. Translation: ABF94414.1. Sequence problems.
DP000009 Genomic DNA. Translation: ABF94415.1.
DP000009 Genomic DNA. Translation: ABF94416.1.
AP008209 Genomic DNA. Translation: BAF11154.1.
AK068957 mRNA. Translation: BAG91182.1.
RefSeqiNP_001049240.1. NM_001055775.1. [Q10QL5-1]
UniGeneiOs.7974.

Genome annotation databases

EnsemblPlantsiOS03T0192500-01; OS03T0192500-01; OS03G0192500. [Q10QL5-1]
GeneIDi4331915.
KEGGiosa:4331915.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DP000009 Genomic DNA. Translation: ABF94412.1 .
DP000009 Genomic DNA. Translation: ABF94413.1 .
DP000009 Genomic DNA. Translation: ABF94414.1 . Sequence problems.
DP000009 Genomic DNA. Translation: ABF94415.1 .
DP000009 Genomic DNA. Translation: ABF94416.1 .
AP008209 Genomic DNA. Translation: BAF11154.1 .
AK068957 mRNA. Translation: BAG91182.1 .
RefSeqi NP_001049240.1. NM_001055775.1. [Q10QL5-1 ]
UniGenei Os.7974.

3D structure databases

ProteinModelPortali Q10QL5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS03T0192500-01 ; OS03T0192500-01 ; OS03G0192500 . [Q10QL5-1 ]
GeneIDi 4331915.
KEGGi osa:4331915.

Organism-specific databases

Gramenei Q10QL5.

Phylogenomic databases

eggNOGi COG0631.
OMAi HASNIGD.

Family and domain databases

Gene3Di 3.60.40.10. 2 hits.
InterProi IPR001932. PP2C-like_dom.
[Graphical view ]
Pfami PF07228. SpoIIE. 1 hit.
[Graphical view ]
SMARTi SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF81606. SSF81606. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
    The rice chromosome 3 sequencing consortium
    Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.
    , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
    Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiBIP2C_ORYSJ
AccessioniPrimary (citable) accession number: Q10QL5
Secondary accession number(s): Q10QL1
, Q10QL2, Q10QL3, Q10QL4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: August 22, 2006
Last modified: May 14, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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