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Q10N03 (MT1B_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified December 11, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Metallothionein-like protein 1B
Alternative name(s):
Class I metallothionein-like protein 1B
OsMT-I-1b
Gene names
Name:MT1B
Ordered Locus Names:Os03g0288000, LOC_Os03g17870
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length72 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Metallothioneins have a high content of cysteine residues that bind various heavy metals.

Tissue specificity

Expressed in leaves of mature plants. Ref.5

Sequence similarities

Belongs to the metallothionein superfamily. Type 15 family.

Ontologies

Keywords
   LigandMetal-binding
Metal-thiolate cluster
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 7272Metallothionein-like protein 1B
PRO_0000263055

Sequences

Sequence LengthMass (Da)Tools
Q10N03 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 4D59D3BA198F3466

FASTA727,134
        10         20         30         40         50         60 
MSCSCGSSCG CGSNCTCGKM YPDLEEKSSS AQATVVLGVA PEKAHFEAAA ESGETAHGCG 

        70 
CGSSCKCNPC NC 

« Hide

References

« Hide 'large scale' references
[1]"Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
The rice chromosome 3 sequencing consortium
Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S. expand/collapse author list , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[5]"Molecular analyses of the metallothionein gene family in rice (Oryza sativa L.)."
Zhou G., Xu Y., Li J., Yang L., Liu J.-Y.
J. Biochem. Mol. Biol. 39:595-606(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, TISSUE SPECIFICITY.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DP000009 Genomic DNA. Translation: ABF95371.1.
AP008209 Genomic DNA. Translation: BAF11696.1.
AK059587 mRNA. No translation available.
RefSeqNP_001049782.1. NM_001056317.1.
UniGeneOs.32714.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS03T0288000-01; OS03T0288000-01; OS03G0288000.
OS03T0288000-02; OS03T0288000-02; OS03G0288000.
GeneID4332487.
KEGGosa:4332487.

Organism-specific databases

GrameneQ10N03.

Phylogenomic databases

eggNOGNOG260937.
HOGENOMHOG000220916.
OMASCKCGKK.
ProtClustDBCLSN2693815.

Family and domain databases

InterProIPR000347. Metalthion_15p.
[Graphical view]
PfamPF01439. Metallothio_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameMT1B_ORYSJ
AccessionPrimary (citable) accession number: Q10N03
Entry history
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: August 22, 2006
Last modified: December 11, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Metallothioneins

Classification of metallothioneins and list of entries