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Q10N03

- MT1B_ORYSJ

UniProt

Q10N03 - MT1B_ORYSJ

Protein

Metallothionein-like protein 1B

Gene

MT1B

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    Metallothioneins have a high content of cysteine residues that bind various heavy metals.

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW

    Keywords - Ligandi

    Metal-binding, Metal-thiolate cluster

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Metallothionein-like protein 1B
    Alternative name(s):
    Class I metallothionein-like protein 1B
    OsMT-I-1b
    Gene namesi
    Name:MT1B
    Ordered Locus Names:Os03g0288000, LOC_Os03g17870
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 3

    Organism-specific databases

    GrameneiQ10N03.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7272Metallothionein-like protein 1BPRO_0000263055Add
    BLAST

    Expressioni

    Tissue specificityi

    Expressed in leaves of mature plants.1 Publication

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiNOG260937.
    HOGENOMiHOG000220916.
    OMAiMSTIYDI.

    Family and domain databases

    InterProiIPR000347. Metalthion_15p.
    [Graphical view]
    PfamiPF01439. Metallothio_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q10N03-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSCSCGSSCG CGSNCTCGKM YPDLEEKSSS AQATVVLGVA PEKAHFEAAA   50
    ESGETAHGCG CGSSCKCNPC NC 72
    Length:72
    Mass (Da):7,134
    Last modified:August 22, 2006 - v1
    Checksum:i4D59D3BA198F3466
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DP000009 Genomic DNA. Translation: ABF95371.1.
    AP008209 Genomic DNA. Translation: BAF11696.1.
    AK059587 mRNA. No translation available.
    RefSeqiNP_001049782.1. NM_001056317.1.
    UniGeneiOs.32714.

    Genome annotation databases

    EnsemblPlantsiOS03T0288000-01; OS03T0288000-01; OS03G0288000.
    OS03T0288000-02; OS03T0288000-02; OS03G0288000.
    GeneIDi4332487.
    KEGGiosa:4332487.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DP000009 Genomic DNA. Translation: ABF95371.1 .
    AP008209 Genomic DNA. Translation: BAF11696.1 .
    AK059587 mRNA. No translation available.
    RefSeqi NP_001049782.1. NM_001056317.1.
    UniGenei Os.32714.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS03T0288000-01 ; OS03T0288000-01 ; OS03G0288000 .
    OS03T0288000-02 ; OS03T0288000-02 ; OS03G0288000 .
    GeneIDi 4332487.
    KEGGi osa:4332487.

    Organism-specific databases

    Gramenei Q10N03.

    Phylogenomic databases

    eggNOGi NOG260937.
    HOGENOMi HOG000220916.
    OMAi MSTIYDI.

    Family and domain databases

    InterProi IPR000347. Metalthion_15p.
    [Graphical view ]
    Pfami PF01439. Metallothio_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
      The rice chromosome 3 sequencing consortium
      Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.
      , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
      Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    5. "Molecular analyses of the metallothionein gene family in rice (Oryza sativa L.)."
      Zhou G., Xu Y., Li J., Yang L., Liu J.-Y.
      J. Biochem. Mol. Biol. 39:595-606(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, TISSUE SPECIFICITY.

    Entry informationi

    Entry nameiMT1B_ORYSJ
    AccessioniPrimary (citable) accession number: Q10N03
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 12, 2006
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 42 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Metallothioneins
      Classification of metallothioneins and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3