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Protein
Submitted name:

Fumarate hydratase 1, mitochondrial, putative, expressed

Gene

Os03g0337900

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-OSA-71403. Citric acid cycle (TCA cycle).

Names & Taxonomyi

Protein namesi
Submitted name:
Fumarate hydratase 1, mitochondrial, putative, expressedImported
Submitted name:
Os03g0337900 proteinImported
Submitted name:
cDNA, clone: J100075P16, full insert sequenceImported
Gene namesi
Name:Os03g0337900Imported
Ordered Locus Names:LOC_Os03g21950Imported
ORF Names:OSNPB_030337900Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 3

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 35Sequence analysisAdd BLAST35
ChainiPRO_500877945236 – 502Sequence analysisAdd BLAST467

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os03g21950.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini50 – 380Lyase_1InterPro annotationAdd BLAST331
Domaini446 – 499FumaraseC_CInterPro annotationAdd BLAST54

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG1317. Eukaryota.
COG0114. LUCA.
KOiK01679.
OMAiFAYLKKA.
OrthoDBiEOG093607CG.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00743. FumaraseC. 1 hit.
InterProiIPR005677. Fum_hydII.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00979. fumC_II. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q10LR5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMVLRRLAG ASAGGAPSPA AAAAAAALLL RPALARPIST GFREERDTFG
60 70 80 90 100
PIRVPNDKLW GAQTQRSLQN FDIGGERERM PVPIIRAFGV LKKCAAKVNM
110 120 130 140 150
EYGLDPTIGK AIMQAAQEVA EGQLDDHFPL VIWQTGSGTQ SNMNANEVIA
160 170 180 190 200
NRAAEILGHK RGEKFVHPND HVNRSQSSND TFPTVMHIAA ATEINSRFVP
210 220 230 240 250
SLQQLHKSLD SKSVEFQDII KIGRTHTQDA TPLTLGQEFS GYATQVKYGI
260 270 280 290 300
DRIVCTLPRM YQLAQGGTAV GTGLNTKKGF DVKIAAAVAE ETELPFVTAE
310 320 330 340 350
NKFEALAAHD AFVESSGAVN TISASLMKIA NDIRLLGSGP RCGLGELILP
360 370 380 390 400
ENEPGSSIMP GKVNPTQCEA LTMVCAQVMG NHVGVTVGGS NGHFELNVFK
410 420 430 440 450
PMIAAGLLRS LRLLGDASVS FEKNCVRGIQ ANHKRISQLL HESLMLVTSL
460 470 480 490 500
NPKIGYDNAA AVAKKAHKEG STLKEAALDL GVLTESEFHE LVVPEKMIGP

SD
Length:502
Mass (Da):53,682
Last modified:August 22, 2006 - v1
Checksum:i3BEB62535C4EBDB4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000009 Genomic DNA. Translation: ABF95833.1.
AK243527 mRNA. Translation: BAH01638.1.
AP014959 Genomic DNA. Translation: BAS84099.1.
RefSeqiXP_015633139.1. XM_015777653.1.
UniGeneiOs.68798.

Genome annotation databases

EnsemblPlantsiOS03T0337900-01; OS03T0337900-01; OS03G0337900.
GeneIDi4332774.
GrameneiOS03T0337900-01; OS03T0337900-01; OS03G0337900.
KEGGiosa:4332774.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DP000009 Genomic DNA. Translation: ABF95833.1.
AK243527 mRNA. Translation: BAH01638.1.
AP014959 Genomic DNA. Translation: BAS84099.1.
RefSeqiXP_015633139.1. XM_015777653.1.
UniGeneiOs.68798.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os03g21950.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS03T0337900-01; OS03T0337900-01; OS03G0337900.
GeneIDi4332774.
GrameneiOS03T0337900-01; OS03T0337900-01; OS03G0337900.
KEGGiosa:4332774.

Phylogenomic databases

eggNOGiKOG1317. Eukaryota.
COG0114. LUCA.
KOiK01679.
OMAiFAYLKKA.
OrthoDBiEOG093607CG.

Enzyme and pathway databases

ReactomeiR-OSA-71403. Citric acid cycle (TCA cycle).

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00743. FumaraseC. 1 hit.
InterProiIPR005677. Fum_hydII.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00979. fumC_II. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ10LR5_ORYSJ
AccessioniPrimary (citable) accession number: Q10LR5
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: November 30, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.