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Q10LP5

- SUS4_ORYSJ

UniProt

Q10LP5 - SUS4_ORYSJ

Protein

Sucrose synthase 4

Gene

SUS4

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 67 (01 Oct 2014)
      Sequence version 1 (22 Aug 2006)
      Previous versions | rss
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    Functioni

    Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways.By similarity

    Catalytic activityi

    NDP-glucose + D-fructose = NDP + sucrose.

    GO - Molecular functioni

    1. sucrose synthase activity Source: UniProtKB-EC

    GO - Biological processi

    1. biosynthetic process Source: InterPro
    2. response to hypoxia Source: EnsemblPlants/Gramene
    3. response to mannitol Source: EnsemblPlants/Gramene
    4. response to water deprivation Source: EnsemblPlants/Gramene
    5. seed maturation Source: EnsemblPlants/Gramene
    6. starch metabolic process Source: EnsemblPlants/Gramene
    7. sucrose metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Protein family/group databases

    CAZyiGT4. Glycosyltransferase Family 4.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Sucrose synthase 4 (EC:2.4.1.13)
    Short name:
    OsSUS4
    Alternative name(s):
    Sucrose-UDP glucosyltransferase 4
    Gene namesi
    Name:SUS4
    Ordered Locus Names:Os03g0340500, LOC_Os03g22120
    ORF Names:OsJ_10783
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 3

    Organism-specific databases

    GrameneiQ10LP5.

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: EnsemblPlants/Gramene
    2. plant-type cell wall Source: EnsemblPlants/Gramene

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 809809Sucrose synthase 4PRO_0000418806Add
    BLAST

    Expressioni

    Tissue specificityi

    Predominantly expressed in the leaf tissues and in caryopses.2 Publications

    Developmental stagei

    In the caryopse, slightly expressed during the middle storage phase and was strongly expressed at the later storage phase.1 Publication

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os03g22120.1.

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni275 – 753479GT-B glycosyltransferaseBy similarityAdd
    BLAST

    Sequence similaritiesi

    Phylogenomic databases

    KOiK00695.
    OMAiFERCKED.

    Family and domain databases

    InterProiIPR001296. Glyco_trans_1.
    IPR000368. Sucrose_synth.
    IPR012820. Sucrose_synthase_pln/cyn.
    [Graphical view]
    PANTHERiPTHR12526:SF27. PTHR12526:SF27. 1 hit.
    PfamiPF00534. Glycos_transf_1. 1 hit.
    PF00862. Sucrose_synth. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02470. sucr_synth. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q10LP5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSGPKLDRTP SIRDRVEDTL HAHRNELVAL LSKYVSQGKG ILQPHHILDA    50
    LDEVQSSGGR ALVEGPFLDV LRSAQEAIVL PPFVAIAVRP RPGVWEYVRV 100
    NVHELSVEQL TVSEYLRFKE ELVDGQYNDP YILELDFEPF NASVPRPNRS 150
    SSIGNGVQFL NRHLSSIMFR NKDCLEPLLD FLRGHRHKGH VMMLNDRIQS 200
    LGRLQSVLTK AEEHLSKLPA DTPYSQFAYK FQEWGLEKGW GDTAGYVLEM 250
    IHLLLDVLQA PDPSTLETFL GRIPMIFNVV VVSPHGYFGQ ANVLGLPDTG 300
    GQIVYILDQV RALENEMVLR LKKQGLDFTP KILIVTRLIP EAKGTSCNQR 350
    LERISGTQHT YILRVPFRNE NGILRKWISR FDVWPYLEKF AEDAAGEIAA 400
    ELQGTPDFII GNYSDGNLVA SLLSYKMGIT QCNIAHALEK TKYPDSDIYW 450
    TKYDEKYHFS CQFTADIIAM NNADFIITST YQEIAGSKNT VGQYESHTAF 500
    TLPGLYRIVH GIDVFDPKFN IVSPGADMSI YFPYTEKAKR LTSLHGSLEN 550
    LISDPEQNDE HIGHLDDRSK PILFSMARLD RVKNITGLVE AYAKNARLRE 600
    LVNLVVVAGY NDVKKSKDRE EIAEIEKMHE LIKTYNLFGQ FRWISAQTNR 650
    ARNGELYRYI ADTHGAFVQP AFYEAFGLTV VEAMTCGLPT FATVHGGPAE 700
    IIEHGISGFH IDPYHPDQAA NLIADFFEQC KQDPNHWVEV SNRGLQRIYE 750
    KYTWKIYSER LMTLAGVYGF WKYVSKLERR ETRRYLEMFY ILKFRELAKT 800
    VPLAVDEAH 809
    Length:809
    Mass (Da):92,217
    Last modified:August 22, 2006 - v1
    Checksum:i4D20B0F0E42A56DC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HQ895722 mRNA. Translation: AEX32877.1.
    DP000009 Genomic DNA. Translation: ABF95853.1.
    AP008209 Genomic DNA. Translation: BAF11978.1.
    CM000140 Genomic DNA. Translation: EAZ26864.1.
    AK099406 mRNA. Translation: BAG94112.1.
    AK102158 mRNA. Translation: BAG95417.1.
    RefSeqiNP_001050064.1. NM_001056599.1.
    UniGeneiOs.17890.

    Genome annotation databases

    EnsemblPlantsiOS03T0340500-01; OS03T0340500-01; OS03G0340500.
    GeneIDi4332788.
    KEGGiosa:4332788.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HQ895722 mRNA. Translation: AEX32877.1 .
    DP000009 Genomic DNA. Translation: ABF95853.1 .
    AP008209 Genomic DNA. Translation: BAF11978.1 .
    CM000140 Genomic DNA. Translation: EAZ26864.1 .
    AK099406 mRNA. Translation: BAG94112.1 .
    AK102158 mRNA. Translation: BAG95417.1 .
    RefSeqi NP_001050064.1. NM_001056599.1.
    UniGenei Os.17890.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os03g22120.1.

    Protein family/group databases

    CAZyi GT4. Glycosyltransferase Family 4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS03T0340500-01 ; OS03T0340500-01 ; OS03G0340500 .
    GeneIDi 4332788.
    KEGGi osa:4332788.

    Organism-specific databases

    Gramenei Q10LP5.

    Phylogenomic databases

    KOi K00695.
    OMAi FERCKED.

    Family and domain databases

    InterProi IPR001296. Glyco_trans_1.
    IPR000368. Sucrose_synth.
    IPR012820. Sucrose_synthase_pln/cyn.
    [Graphical view ]
    PANTHERi PTHR12526:SF27. PTHR12526:SF27. 1 hit.
    Pfami PF00534. Glycos_transf_1. 1 hit.
    PF00862. Sucrose_synth. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02470. sucr_synth. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Identification and characterization of the duplicate rice sucrose synthase genes OsSUS5 and OsSUS7 which are associated with the plasma membrane."
      Cho J.I., Kim H.B., Kim C.Y., Hahn T.R., Jeon J.S.
      Mol. Cells 31:553-561(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
      Strain: cv. Nipponbare.
    2. "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
      The rice chromosome 3 sequencing consortium
      Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.
      , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
      Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    5. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    6. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    7. "An expression analysis profile for the entire sucrose synthase gene family in rice."
      Hirose T., Scofield G.N., Terao T.
      Plant Sci. 174:534-543(2008)
      Cited for: GENE FAMILY, TISSUE SPECIFICITY.

    Entry informationi

    Entry nameiSUS4_ORYSJ
    AccessioniPrimary (citable) accession number: Q10LP5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 5, 2012
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 67 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3