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Q10LP5

- SUS4_ORYSJ

UniProt

Q10LP5 - SUS4_ORYSJ

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Protein

Sucrose synthase 4

Gene

SUS4

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways.By similarity

Catalytic activityi

NDP-glucose + D-fructose = NDP + sucrose.

GO - Molecular functioni

  1. sucrose synthase activity Source: UniProtKB-EC

GO - Biological processi

  1. biosynthetic process Source: InterPro
  2. sucrose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Protein family/group databases

CAZyiGT4. Glycosyltransferase Family 4.

Names & Taxonomyi

Protein namesi
Recommended name:
Sucrose synthase 4 (EC:2.4.1.13)
Short name:
OsSUS4
Alternative name(s):
Sucrose-UDP glucosyltransferase 4
Gene namesi
Name:SUS4
Ordered Locus Names:Os03g0340500, LOC_Os03g22120
ORF Names:OsJ_10783
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 3

Organism-specific databases

GrameneiQ10LP5.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 809809Sucrose synthase 4PRO_0000418806Add
BLAST

Expressioni

Tissue specificityi

Predominantly expressed in the leaf tissues and in caryopses.2 Publications

Developmental stagei

In the caryopse, slightly expressed during the middle storage phase and was strongly expressed at the later storage phase.1 Publication

Gene expression databases

ExpressionAtlasiQ10LP5. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os03g22120.1.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni275 – 753479GT-B glycosyltransferaseBy similarityAdd
BLAST

Sequence similaritiesi

Phylogenomic databases

InParanoidiQ10LP5.
KOiK00695.
OMAiFERCKED.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR000368. Sucrose_synth.
IPR012820. Sucrose_synthase_pln/cyn.
[Graphical view]
PANTHERiPTHR12526:SF27. PTHR12526:SF27. 1 hit.
PfamiPF00534. Glycos_transf_1. 1 hit.
PF00862. Sucrose_synth. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02470. sucr_synth. 1 hit.

Sequencei

Sequence statusi: Complete.

Q10LP5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSGPKLDRTP SIRDRVEDTL HAHRNELVAL LSKYVSQGKG ILQPHHILDA
60 70 80 90 100
LDEVQSSGGR ALVEGPFLDV LRSAQEAIVL PPFVAIAVRP RPGVWEYVRV
110 120 130 140 150
NVHELSVEQL TVSEYLRFKE ELVDGQYNDP YILELDFEPF NASVPRPNRS
160 170 180 190 200
SSIGNGVQFL NRHLSSIMFR NKDCLEPLLD FLRGHRHKGH VMMLNDRIQS
210 220 230 240 250
LGRLQSVLTK AEEHLSKLPA DTPYSQFAYK FQEWGLEKGW GDTAGYVLEM
260 270 280 290 300
IHLLLDVLQA PDPSTLETFL GRIPMIFNVV VVSPHGYFGQ ANVLGLPDTG
310 320 330 340 350
GQIVYILDQV RALENEMVLR LKKQGLDFTP KILIVTRLIP EAKGTSCNQR
360 370 380 390 400
LERISGTQHT YILRVPFRNE NGILRKWISR FDVWPYLEKF AEDAAGEIAA
410 420 430 440 450
ELQGTPDFII GNYSDGNLVA SLLSYKMGIT QCNIAHALEK TKYPDSDIYW
460 470 480 490 500
TKYDEKYHFS CQFTADIIAM NNADFIITST YQEIAGSKNT VGQYESHTAF
510 520 530 540 550
TLPGLYRIVH GIDVFDPKFN IVSPGADMSI YFPYTEKAKR LTSLHGSLEN
560 570 580 590 600
LISDPEQNDE HIGHLDDRSK PILFSMARLD RVKNITGLVE AYAKNARLRE
610 620 630 640 650
LVNLVVVAGY NDVKKSKDRE EIAEIEKMHE LIKTYNLFGQ FRWISAQTNR
660 670 680 690 700
ARNGELYRYI ADTHGAFVQP AFYEAFGLTV VEAMTCGLPT FATVHGGPAE
710 720 730 740 750
IIEHGISGFH IDPYHPDQAA NLIADFFEQC KQDPNHWVEV SNRGLQRIYE
760 770 780 790 800
KYTWKIYSER LMTLAGVYGF WKYVSKLERR ETRRYLEMFY ILKFRELAKT

VPLAVDEAH
Length:809
Mass (Da):92,217
Last modified:August 22, 2006 - v1
Checksum:i4D20B0F0E42A56DC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HQ895722 mRNA. Translation: AEX32877.1.
DP000009 Genomic DNA. Translation: ABF95853.1.
AP008209 Genomic DNA. Translation: BAF11978.1.
CM000140 Genomic DNA. Translation: EAZ26864.1.
AK099406 mRNA. Translation: BAG94112.1.
AK102158 mRNA. Translation: BAG95417.1.
RefSeqiNP_001050064.1. NM_001056599.1.
UniGeneiOs.17890.

Genome annotation databases

EnsemblPlantsiOS03T0340500-01; OS03T0340500-01; OS03G0340500.
GeneIDi4332788.
KEGGiosa:4332788.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HQ895722 mRNA. Translation: AEX32877.1 .
DP000009 Genomic DNA. Translation: ABF95853.1 .
AP008209 Genomic DNA. Translation: BAF11978.1 .
CM000140 Genomic DNA. Translation: EAZ26864.1 .
AK099406 mRNA. Translation: BAG94112.1 .
AK102158 mRNA. Translation: BAG95417.1 .
RefSeqi NP_001050064.1. NM_001056599.1.
UniGenei Os.17890.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 39947.LOC_Os03g22120.1.

Protein family/group databases

CAZyi GT4. Glycosyltransferase Family 4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS03T0340500-01 ; OS03T0340500-01 ; OS03G0340500 .
GeneIDi 4332788.
KEGGi osa:4332788.

Organism-specific databases

Gramenei Q10LP5.

Phylogenomic databases

InParanoidi Q10LP5.
KOi K00695.
OMAi FERCKED.

Gene expression databases

ExpressionAtlasi Q10LP5. baseline and differential.

Family and domain databases

InterProi IPR001296. Glyco_trans_1.
IPR000368. Sucrose_synth.
IPR012820. Sucrose_synthase_pln/cyn.
[Graphical view ]
PANTHERi PTHR12526:SF27. PTHR12526:SF27. 1 hit.
Pfami PF00534. Glycos_transf_1. 1 hit.
PF00862. Sucrose_synth. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02470. sucr_synth. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Identification and characterization of the duplicate rice sucrose synthase genes OsSUS5 and OsSUS7 which are associated with the plasma membrane."
    Cho J.I., Kim H.B., Kim C.Y., Hahn T.R., Jeon J.S.
    Mol. Cells 31:553-561(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
    Strain: cv. Nipponbare.
  2. "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
    The rice chromosome 3 sequencing consortium
    Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.
    , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
    Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  5. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  6. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  7. "An expression analysis profile for the entire sucrose synthase gene family in rice."
    Hirose T., Scofield G.N., Terao T.
    Plant Sci. 174:534-543(2008)
    Cited for: GENE FAMILY, TISSUE SPECIFICITY.

Entry informationi

Entry nameiSUS4_ORYSJ
AccessioniPrimary (citable) accession number: Q10LP5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 5, 2012
Last sequence update: August 22, 2006
Last modified: October 29, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3