Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Protein ABI-1

Gene

abi-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein kinase binding Source: WormBase
  2. protein N-terminus binding Source: WormBase

GO - Biological processi

  1. cell migration Source: WormBase
  2. cell projection morphogenesis Source: WormBase
  3. neuron migration Source: WormBase
  4. positive regulation of engulfment of apoptotic cell Source: WormBase
Complete GO annotation...

Enzyme and pathway databases

SignaLinkiQ10929.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein ABI-1Imported
Gene namesi
Name:abi-1Imported
ORF Names:B0336.6Imported, CELE_B0336.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome III

Organism-specific databases

WormBaseiB0336.6; CE29545; WBGene00015146; abi-1.

Subcellular locationi

GO - Cellular componenti

  1. axon Source: WormBase
  2. cytoplasm Source: WormBase
  3. dendrite Source: WormBase
  4. neuronal cell body Source: WormBase
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ10929.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
CELE_F32B4.4O622034EBI-315750,EBI-320780
CELE_F41B4.1Q966J65EBI-315750,EBI-327612
M04F3.5Q95Y954EBI-315750,EBI-2315841
M57.1Q9TYX93EBI-315750,EBI-2315745
mig-10P344006EBI-315750,EBI-2315872
vab-3G5EDS14EBI-315750,EBI-319610

Protein-protein interaction databases

DIPiDIP-25719N.
IntActiQ10929. 28 interactions.
MINTiMINT-1043709.
STRINGi6239.B0336.6.2.

Structurei

3D structure databases

ProteinModelPortaliQ10929.
SMRiQ10929. Positions 2-156, 392-466.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG262939.
GeneTreeiENSGT00390000003756.
HOGENOMiHOG000293213.
InParanoidiQ10929.
OMAiVEVEWIP.
PhylomeDBiQ10929.

Family and domain databases

InterProiIPR028457. ABI.
IPR012849. Abl-interactor_HHR_dom.
IPR001452. SH3_domain.
[Graphical view]
PANTHERiPTHR10460. PTHR10460. 1 hit.
PfamiPF07815. Abi_HHR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q10929-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVNDLQELI ERRIPDNRAQ LETSHANLQQ VAAYCEDNYI QSNNKSAALE
60 70 80 90 100
ESKKFAIQAL ASVAYQINKM VTDLHDMLAL QTDKVNSLTN QVQYVSQVVD
110 120 130 140 150
VHKEKLARRE IGSLTTNKTL FKQPKIIAPA IPDEKQRYQR TPIDFSVLDG
160 170 180 190 200
IGHGVRTSDP PRAAPISRAT SSISGSSPSQ FHNESPAYGV YAGERTATLG
210 220 230 240 250
RTMRPYAPSI APSDYRLPQV TPQSESRIGR QMSHGSEFGD HMSGGGGSGS
260 270 280 290 300
QHGSSDYNSI YQPDRYGTIR AGGRTTVDGS FSIPRLSSAQ SSAGGPESPT
310 320 330 340 350
FPLPPPAMNY TGYVAPGSVV QQQQQQQMQQ QNYGTIRKST VNRHDLPPPP
360 370 380 390 400
NSLLTGMSSR MPTQDDMDDL PPPPESVGGS SAYGVFAGRT ESYSSSQPPS
410 420 430 440 450
LFDTSAGWMP NEYLEKVRVL YDYDAAKEDE LTLRENAIVY VLKKNDDDWY
460
EGVLDGVTGL FPGNYVVPV
Length:469
Mass (Da):51,307
Last modified:December 1, 2001 - v2
Checksum:iFC66F475CACF2787
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080138 Genomic DNA. Translation: CCD61521.1.
RefSeqiNP_498224.1. NM_065823.4.
UniGeneiCel.10950.

Genome annotation databases

EnsemblMetazoaiB0336.6.1; B0336.6.1; WBGene00015146.
B0336.6.2; B0336.6.2; WBGene00015146.
GeneIDi175789.
KEGGicel:CELE_B0336.6.
UCSCiB0336.6.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080138 Genomic DNA. Translation: CCD61521.1.
RefSeqiNP_498224.1. NM_065823.4.
UniGeneiCel.10950.

3D structure databases

ProteinModelPortaliQ10929.
SMRiQ10929. Positions 2-156, 392-466.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-25719N.
IntActiQ10929. 28 interactions.
MINTiMINT-1043709.
STRINGi6239.B0336.6.2.

Proteomic databases

PaxDbiQ10929.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiB0336.6.1; B0336.6.1; WBGene00015146.
B0336.6.2; B0336.6.2; WBGene00015146.
GeneIDi175789.
KEGGicel:CELE_B0336.6.
UCSCiB0336.6.1. c. elegans.

Organism-specific databases

CTDi175789.
WormBaseiB0336.6; CE29545; WBGene00015146; abi-1.

Phylogenomic databases

eggNOGiNOG262939.
GeneTreeiENSGT00390000003756.
HOGENOMiHOG000293213.
InParanoidiQ10929.
OMAiVEVEWIP.
PhylomeDBiQ10929.

Enzyme and pathway databases

SignaLinkiQ10929.

Miscellaneous databases

NextBioi889676.

Family and domain databases

InterProiIPR028457. ABI.
IPR012849. Abl-interactor_HHR_dom.
IPR001452. SH3_domain.
[Graphical view]
PANTHERiPTHR10460. PTHR10460. 1 hit.
PfamiPF07815. Abi_HHR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ10929_CAEEL
AccessioniPrimary (citable) accession number: Q10929
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: December 1, 2001
Last modified: March 4, 2015
This is version 112 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.