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Q10929

- Q10929_CAEEL

UniProt

Q10929 - Q10929_CAEEL

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Protein
Submitted name:

Protein ABI-1

Gene
abi-1, B0336.6, CELE_B0336.6
Organism
Caenorhabditis elegans
Status
Unreviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein binding Source: IntAct
  2. protein kinase binding Source: WormBase
  3. protein N-terminus binding Source: WormBase

GO - Biological processi

  1. cell migration Source: WormBase
  2. cell projection morphogenesis Source: WormBase
  3. neuron migration Source: WormBase
  4. positive regulation of engulfment of apoptotic cell Source: WormBase
Complete GO annotation...

Enzyme and pathway databases

SignaLinkiQ10929.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein ABI-1Imported
Gene namesi
Name:abi-1Imported
ORF Names:B0336.6Imported, CELE_B0336.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome III

Organism-specific databases

WormBaseiB0336.6; CE29545; WBGene00015146; abi-1.

Subcellular locationi

GO - Cellular componenti

  1. axon Source: WormBase
  2. cytoplasm Source: WormBase
  3. dendrite Source: WormBase
  4. neuronal cell body Source: WormBase
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ10929.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
CELE_F32B4.4O622034EBI-315750,EBI-320780
CELE_F41B4.1Q966J65EBI-315750,EBI-327612
M04F3.5Q95Y954EBI-315750,EBI-2315841
M57.1Q9TYX93EBI-315750,EBI-2315745
mig-10P344006EBI-315750,EBI-2315872
vab-3G5EDS14EBI-315750,EBI-319610

Protein-protein interaction databases

DIPiDIP-25719N.
IntActiQ10929. 28 interactions.
MINTiMINT-1043709.
STRINGi6239.B0336.6.2.

Structurei

3D structure databases

ProteinModelPortaliQ10929.
SMRiQ10929. Positions 2-156, 392-466.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG262939.
GeneTreeiENSGT00390000003756.
HOGENOMiHOG000293213.
InParanoidiQ10929.
OMAiERRIPDN.
PhylomeDBiQ10929.

Family and domain databases

InterProiIPR028457. ABI.
IPR012849. Abl-interactor_HHR_dom.
IPR001452. SH3_domain.
[Graphical view]
PANTHERiPTHR10460. PTHR10460. 1 hit.
PfamiPF07815. Abi_HHR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q10929-1 [UniParc]FASTAAdd to Basket

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MSVNDLQELI ERRIPDNRAQ LETSHANLQQ VAAYCEDNYI QSNNKSAALE    50
ESKKFAIQAL ASVAYQINKM VTDLHDMLAL QTDKVNSLTN QVQYVSQVVD 100
VHKEKLARRE IGSLTTNKTL FKQPKIIAPA IPDEKQRYQR TPIDFSVLDG 150
IGHGVRTSDP PRAAPISRAT SSISGSSPSQ FHNESPAYGV YAGERTATLG 200
RTMRPYAPSI APSDYRLPQV TPQSESRIGR QMSHGSEFGD HMSGGGGSGS 250
QHGSSDYNSI YQPDRYGTIR AGGRTTVDGS FSIPRLSSAQ SSAGGPESPT 300
FPLPPPAMNY TGYVAPGSVV QQQQQQQMQQ QNYGTIRKST VNRHDLPPPP 350
NSLLTGMSSR MPTQDDMDDL PPPPESVGGS SAYGVFAGRT ESYSSSQPPS 400
LFDTSAGWMP NEYLEKVRVL YDYDAAKEDE LTLRENAIVY VLKKNDDDWY 450
EGVLDGVTGL FPGNYVVPV 469
Length:469
Mass (Da):51,307
Last modified:December 1, 2001 - v2
Checksum:iFC66F475CACF2787
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO080138 Genomic DNA. Translation: CCD61521.1.
RefSeqiNP_498224.1. NM_065823.4.
UniGeneiCel.10950.

Genome annotation databases

EnsemblMetazoaiB0336.6.1; B0336.6.1; WBGene00015146.
B0336.6.2; B0336.6.2; WBGene00015146.
GeneIDi175789.
KEGGicel:CELE_B0336.6.
UCSCiB0336.6.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO080138 Genomic DNA. Translation: CCD61521.1 .
RefSeqi NP_498224.1. NM_065823.4.
UniGenei Cel.10950.

3D structure databases

ProteinModelPortali Q10929.
SMRi Q10929. Positions 2-156, 392-466.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-25719N.
IntActi Q10929. 28 interactions.
MINTi MINT-1043709.
STRINGi 6239.B0336.6.2.

Proteomic databases

PaxDbi Q10929.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai B0336.6.1 ; B0336.6.1 ; WBGene00015146 .
B0336.6.2 ; B0336.6.2 ; WBGene00015146 .
GeneIDi 175789.
KEGGi cel:CELE_B0336.6.
UCSCi B0336.6.1. c. elegans.

Organism-specific databases

CTDi 175789.
WormBasei B0336.6 ; CE29545 ; WBGene00015146 ; abi-1.

Phylogenomic databases

eggNOGi NOG262939.
GeneTreei ENSGT00390000003756.
HOGENOMi HOG000293213.
InParanoidi Q10929.
OMAi ERRIPDN.
PhylomeDBi Q10929.

Enzyme and pathway databases

SignaLinki Q10929.

Miscellaneous databases

NextBioi 889676.

Family and domain databases

InterProi IPR028457. ABI.
IPR012849. Abl-interactor_HHR_dom.
IPR001452. SH3_domain.
[Graphical view ]
PANTHERi PTHR10460. PTHR10460. 1 hit.
Pfami PF07815. Abi_HHR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view ]
PRINTSi PR00452. SH3DOMAIN.
SMARTi SM00326. SH3. 1 hit.
[Graphical view ]
SUPFAMi SSF50044. SSF50044. 1 hit.
PROSITEi PS50002. SH3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiQ10929_CAEEL
AccessioniPrimary (citable) accession number: Q10929
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: December 1, 2001
Last modified: July 9, 2014
This is version 107 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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