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Protein
Submitted name:

ForKHead transcription factor family

Gene

fkh-6

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

  • gonad development Source: UniProtKB
  • male germ-line sex determination Source: WormBase
  • male gonad development Source: WormBase
Complete GO annotation...

Keywords - Ligandi

DNA-bindingSAAS annotation

Enzyme and pathway databases

SignaLinkiQ10924.

Names & Taxonomyi

Protein namesi
Submitted name:
ForKHead transcription factor familyImported
Gene namesi
Name:fkh-6Imported
ORF Names:B0286.5Imported, CELE_B0286.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiB0286.5; CE03865; WBGene00001438; fkh-6.

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: WormBase
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ10924.
PRIDEiQ10924.

Interactioni

Protein-protein interaction databases

IntActiQ10924. 54 interactions.
STRINGi6239.B0286.5.

Structurei

3D structure databases

ProteinModelPortaliQ10924.
SMRiQ10924. Positions 21-117.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini21 – 122102Fork-head DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains fork-head DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiKOG2294. Eukaryota.
COG5025. LUCA.
GeneTreeiENSGT00800000124014.
HOGENOMiHOG000017226.
InParanoidiQ10924.
OMAiGQSCAND.
OrthoDBiEOG7C8GHD.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR001766. Fork_head_dom.
IPR018122. TF_fork_head_CS_1.
IPR030456. TF_fork_head_CS_2.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00250. Forkhead. 1 hit.
[Graphical view]
PRINTSiPR00053. FORKHEAD.
SMARTiSM00339. FH. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS00657. FORK_HEAD_1. 1 hit.
PS00658. FORK_HEAD_2. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q10924-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRHQTHLPF HIVQEGNSID KPPYSYVALI AMAIDASPDK RMTLNQIYKF
60 70 80 90 100
IEAKFPYYRD ADAKRKQGWQ NSIRHNLSLN DCFVKKARDG QSCANDRKGN
110 120 130 140 150
YWQMVADNAP QFDNGNFKRR RVKRLGIGKM GYANTTETTE TGTILQQQLP
160 170 180 190 200
FFNGLKWPQN IQTMDPFQFF KFQYPNSITD SANTSQINNS SSSSSSFDTS
210 220 230 240 250
IYTSAFPIPT SHFDTNLVAP SQPPPVVSDV EVVPSDTVKE EVLVDMKPLI
260 270 280 290 300
PGISSTTFLT SLQMTDPRSI EQQQLLSTAS NMYPNAFMPP YTNWSCQPTT
310 320
TFTGLSFDDP SLYGYGQQFP ASS
Length:323
Mass (Da):36,421
Last modified:November 1, 1996 - v1
Checksum:i00A2BA04326ACA2A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD61668.1.
PIRiT15311.
RefSeqiNP_494775.1. NM_062374.1.
UniGeneiCel.16060.

Genome annotation databases

EnsemblMetazoaiB0286.5; B0286.5; WBGene00001438.
GeneIDi181907.
KEGGicel:CELE_B0286.5.
UCSCiB0286.5. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD61668.1.
PIRiT15311.
RefSeqiNP_494775.1. NM_062374.1.
UniGeneiCel.16060.

3D structure databases

ProteinModelPortaliQ10924.
SMRiQ10924. Positions 21-117.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ10924. 54 interactions.
STRINGi6239.B0286.5.

Proteomic databases

PaxDbiQ10924.
PRIDEiQ10924.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiB0286.5; B0286.5; WBGene00001438.
GeneIDi181907.
KEGGicel:CELE_B0286.5.
UCSCiB0286.5. c. elegans.

Organism-specific databases

CTDi181907.
WormBaseiB0286.5; CE03865; WBGene00001438; fkh-6.

Phylogenomic databases

eggNOGiKOG2294. Eukaryota.
COG5025. LUCA.
GeneTreeiENSGT00800000124014.
HOGENOMiHOG000017226.
InParanoidiQ10924.
OMAiGQSCAND.
OrthoDBiEOG7C8GHD.

Enzyme and pathway databases

SignaLinkiQ10924.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR001766. Fork_head_dom.
IPR018122. TF_fork_head_CS_1.
IPR030456. TF_fork_head_CS_2.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00250. Forkhead. 1 hit.
[Graphical view]
PRINTSiPR00053. FORKHEAD.
SMARTiSM00339. FH. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS00657. FORK_HEAD_1. 1 hit.
PS00658. FORK_HEAD_2. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ10924_CAEEL
AccessioniPrimary (citable) accession number: Q10924
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 6, 2016
This is version 136 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.