Unreviewed,
UniProtKB/TrEMBL Q10577 (Q10577_CAEEL)
Last modified
June 16, 2009.
Version 64.
History...
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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Caenorhabditis elegans pre-RNA processing 21 EMBL AAA82164.1 Submitted name: Yeast prp (Splicing factor) related protein 21 EMBL AAC78179.1 | ||||||
| Gene names |
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| Organism | Caenorhabditis elegans [Complete proteome] EMBL AAA82164.1 | ||||||
| Taxonomic identifier | 6239 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis |
Protein attributes
| Sequence length | 655 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
Ontologies
| Keywords | |
|---|---|
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | RNA processing Inferred from electronic annotation. Source: InterPro collagen and cuticulin-based cuticle developmentInferred from mutant phenotype. Source: WormBase embryonic development ending in birth or egg hatchingInferred from mutant phenotype. Source: WormBase hermaphrodite genitalia developmentInferred from mutant phenotype. Source: WormBase morphogenesis of an epitheliumInferred from mutant phenotype. Source: WormBase protein modification processInferred from electronic annotation. Source: InterPro |
| Molecular function | RNA binding Inferred from electronic annotation. Source: InterPro protein bindingInferred from physical interaction. Source: IntAct |
| Complete GO annotation... | |
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "SWAP pre-mRNA splicing regulators are a novel, ancient protein family sharing a highly conserved sequence motif with the prp21 family of constitutive splicing proteins." Spikes D.A., Kramer J., Bingham P.M., van Doren K. Nucleic Acids Res. 22:4510-4519(1994) [PubMed: 7971282] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | "Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2. |
Cross-references
Sequence databases | |
|---|---|
| U09415 mRNA. Translation: AAA82164.1. AF106576 Genomic DNA. Translation: AAC78179.1. | |
| PIR | S50096. |
| RefSeq | NP_493746.1. |
| UniGene | Cel.19742 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP:24891N. |
| IntAct | Q10577. 15 interactions. |
Genome annotation databases | |
| Ensembl | W07E6.4. Caenorhabditis elegans. [Contig view] |
| GeneID | 173440. |
| KEGG | cel:W07E6.4. |
Organism-specific databases | |
| WormBase | WBGene00004188. prp-21. |
| WormPep | W07E6.4. CE17296. [WorfDB] |
Phylogenomic databases | |
| OMA | Q10577. ATNIPSS. |
Gene expression databases | |
| ArrayExpress | Q10577. |
Family and domain databases | |
| InterPro | IPR000061. Surp. IPR000626. Ubiquitin. IPR019955. Ubiquitin_supergroup. [Graphical view] |
| Pfam | PF01805. Surp. 2 hits. PF00240. ubiquitin. 1 hit. [Graphical view] |
| SMART | SM00648. SWAP. 2 hits. SM00213. UBQ. 1 hit. [Graphical view] |
| PROSITE | PS50128. SURP. 2 hits. PS50053. UBIQUITIN_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 879663. |
Entry information
| Entry name | Q10577_CAEEL | ||||||||
| Accession | Primary (citable) accession number: Q10577 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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