Unreviewed, UniProtKB/TrEMBL Q10577 (Q10577_CAEEL)

Names and origin

Protein names

Submitted name:
    Caenorhabditis elegans pre-RNA processing 21 EMBL AAA82164.1
Submitted name:
    Yeast prp (Splicing factor) related protein 21 EMBL AAC78179.1

Gene names

Name:	prp-21 WormBase WBGene00004188 WormPep W07E6.4
Synonyms:	Ceprp21 EMBL AAA82164.1
ORF Names:	W07E6.4 WormBase WBGene00004188 WormPep W07E6.4

Organism

Caenorhabditis elegans [Complete proteome] EMBL AAA82164.1

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	655 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro collagen and cuticulin-based cuticle development Inferred from mutant phenotype. Source: WormBase embryonic development ending in birth or egg hatching Inferred from mutant phenotype. Source: WormBase hermaphrodite genitalia development Inferred from mutant phenotype. Source: WormBase morphogenesis of an epithelium Inferred from mutant phenotype. Source: WormBase protein modification process Inferred from electronic annotation. Source: InterPro
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q10577-1 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 3714E61E6B88EC60	FASTA	655	73,812
	10 20 30 40 50 60 MTAVVSNREE DSMNNEPSLS GRAIIGLIYP PPDIRTIVDK TARFAAKNGV DFENKIREKE 70 80 90 100 110 120 AKNPKFNFLS ITDPYHAYYK KMVYDFSEGR VEAPKVPQAV KEHVKKAEFV PSAPPPAYEF 130 140 150 160 170 180 SADPSTINAY DLDLIRLVAL FVARNGRQFL TQLMTREARN YQFDFLKPAH CNFTYFTKLV 190 200 210 220 230 240 DQYQKVLVPS TNVVAQLQDD ATNKKRLIED INYRVSWEKH QKGLKDREEA EAEKERQAYA 250 260 270 280 290 300 SIDWHDFVVV QTVDFQPGDT SQLPPLCTPK DVGARILLEA RNEMQKAAAE MQEMDMEESD 310 320 330 340 350 360 SDDEDAVQAP EAPAFTAPLP PTKQKDVIVR DYDPKRNVTQ KPKAVENWII SPLTGERIPS 370 380 390 400 410 420 DKLAEHVRYN TVDSQYKEDR DRHIGERSTE EPVLALGADI SRNLGNFAER RTDIFGVGGE 430 440 450 460 470 480 QTMIGKKLGE EDNSQQGQNK LIWDGTEETR DMITRAVQNK VTLDQQINEI HRQHGFVADP 490 500 510 520 530 540 SKEKIGAQQV PRHQSTQGNV TITQGITNIP GQMPSGWPPV PPMGMPGMPN QALPPIRQMD 550 560 570 580 590 600 FGGGPPAKRP RTEDDLIPEA DWLKKVNGAI SLNVHLPQAP EHGMDGSIVQ FTIQVTAPMS 610 620 630 640 650 ELKQQIQDRY GMPVGKQKLM SDGLFVKDNM SSAFYNLADR TAIYLQVKER GGKKK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"SWAP pre-mRNA splicing regulators are a novel, ancient protein family sharing a highly conserved sequence motif with the prp21 family of constitutive splicing proteins." Spikes D.A., Kramer J., Bingham P.M., van Doren K. Nucleic Acids Res. 22:4510-4519(1994) [PubMed: 7971282] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U09415 mRNA. Translation: AAA82164.1. AF106576 Genomic DNA. Translation: AAC78179.1.
PIR	S50096.
RefSeq	NP_493746.1.
UniGene	Cel.19742
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:24891N.
IntAct	Q10577. 15 interactions.
Genome annotation databases
Ensembl	W07E6.4. Caenorhabditis elegans. [Contig view]
GeneID	173440.
KEGG	cel:W07E6.4.
Organism-specific databases
WormBase	WBGene00004188. prp-21.
WormPep	W07E6.4. CE17296. [WorfDB]
Phylogenomic databases
OMA	Q10577. ATNIPSS.
Gene expression databases
ArrayExpress	Q10577.
Family and domain databases
InterPro	IPR000061. Surp. IPR000626. Ubiquitin. IPR019955. Ubiquitin_supergroup. [Graphical view]
Pfam	PF01805. Surp. 2 hits. PF00240. ubiquitin. 1 hit. [Graphical view]
SMART	SM00648. SWAP. 2 hits. SM00213. UBQ. 1 hit. [Graphical view]
PROSITE	PS50128. SURP. 2 hits. PS50053. UBIQUITIN_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	879663.

Entry information

Entry name

Q10577_CAEEL

Accession

Primary (citable) accession number: Q10577

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	June 16, 2009
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)