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Protein

Uncharacterized protein C17C9.11c

Gene

SPAC17C9.11c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri3 – 2725C2H2-typeAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C17C9.11c
Gene namesi
ORF Names:SPAC17C9.11c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC17C9.11c.
PomBaseiSPAC17C9.11c.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 240240Uncharacterized protein C17C9.11cPRO_0000116617Add
BLAST

Proteomic databases

MaxQBiQ10483.

Interactioni

Protein-protein interaction databases

BioGridi278642. 7 interactions.
MINTiMINT-4699632.

Structurei

3D structure databases

ProteinModelPortaliQ10483.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 C2H2-type zinc finger.Curated

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri3 – 2725C2H2-typeAdd
BLAST

Keywords - Domaini

Zinc-finger

Phylogenomic databases

InParanoidiQ10483.
OMAiANHANGI.
OrthoDBiEOG75QRG1.
PhylomeDBiQ10483.

Family and domain databases

InterProiIPR029071. Ubiquitin-rel_dom.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q10483-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLKCLECDK LLSSIEMAEF HSTKTSHDQF EETEEEIKKR SPEELKQAIE
60 70 80 90 100
ALREKAKEKK EKERILALEE KKTNYKILQK SNDETAQAMR KMQDQARLRD
110 120 130 140 150
LQKIRQQKAE DAEQRKKILA EIERDKKRRA AERENKNSSV KETAAPIKQP
160 170 180 190 200
KNANSSSTCT RTPPTSGRFS IRHDGQVCNI TIAAEETLRQ LAQQVAEKMN
210 220 230 240
VSPPTKFTTT FPRASYGTDV FDKPVNQLDL FPSAVLIPQW
Length:240
Mass (Da):27,602
Last modified:August 14, 2001 - v2
Checksum:iA3131E14D3907D11
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAA97342.2.
RefSeqiNP_594595.1. NM_001020023.2.

Genome annotation databases

EnsemblFungiiSPAC17C9.11c.1; SPAC17C9.11c.1:pep; SPAC17C9.11c.
GeneIDi2542167.
KEGGispo:SPAC17C9.11c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAA97342.2.
RefSeqiNP_594595.1. NM_001020023.2.

3D structure databases

ProteinModelPortaliQ10483.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi278642. 7 interactions.
MINTiMINT-4699632.

Proteomic databases

MaxQBiQ10483.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC17C9.11c.1; SPAC17C9.11c.1:pep; SPAC17C9.11c.
GeneIDi2542167.
KEGGispo:SPAC17C9.11c.

Organism-specific databases

EuPathDBiFungiDB:SPAC17C9.11c.
PomBaseiSPAC17C9.11c.

Phylogenomic databases

InParanoidiQ10483.
OMAiANHANGI.
OrthoDBiEOG75QRG1.
PhylomeDBiQ10483.

Miscellaneous databases

PROiQ10483.

Family and domain databases

InterProiIPR029071. Ubiquitin-rel_dom.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.

Entry informationi

Entry nameiYDFB_SCHPO
AccessioniPrimary (citable) accession number: Q10483
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: August 14, 2001
Last modified: June 8, 2016
This is version 89 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.