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Q10356

- YDB3_SCHPO

UniProt

Q10356 - YDB3_SCHPO

Protein

Uncharacterized protein C22E12.03c

Gene

SPAC22E12.03c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 83 (01 Oct 2014)
      Sequence version 1 (01 Oct 1996)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. glyoxalase III activity Source: PomBase

    GO - Biological processi

    1. lactate biosynthetic process Source: GOC

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein C22E12.03c
    Gene namesi
    ORF Names:SPAC22E12.03c
    OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
    Taxonomic identifieri284812 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
    ProteomesiUP000002485: Chromosome I

    Organism-specific databases

    PomBaseiSPAC22E12.03c.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: PomBase
    2. cytosol Source: PomBase
    3. nucleus Source: PomBase

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 191191Uncharacterized protein C22E12.03cPRO_0000157857Add
    BLAST

    Proteomic databases

    MaxQBiQ10356.

    Interactioni

    Protein-protein interaction databases

    MINTiMINT-4699059.
    STRINGi4896.SPAC22E12.03c-1.

    Structurei

    Secondary structure

    1
    191
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi4 – 96
    Helixi14 – 2613
    Beta strandi31 – 388
    Beta strandi43 – 453
    Beta strandi51 – 533
    Beta strandi55 – 573
    Helixi58 – 603
    Helixi64 – 707
    Beta strandi72 – 765
    Helixi80 – 878
    Helixi90 – 9910
    Beta strandi106 – 1105
    Helixi111 – 1144
    Helixi115 – 1195
    Beta strandi125 – 1273
    Helixi131 – 1333
    Helixi134 – 1396
    Beta strandi147 – 1526
    Beta strandi155 – 1584
    Helixi161 – 1633
    Helixi164 – 17512
    Helixi178 – 18710

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4GDHX-ray1.05A/B/C/D1-191[»]
    4GE0X-ray1.45A/B/C/D1-191[»]
    4GE3X-ray1.50A/B/C/D1-191[»]
    ProteinModelPortaliQ10356.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the peptidase C56 family.Curated

    Phylogenomic databases

    eggNOGiCOG0693.
    HOGENOMiHOG000063194.
    OMAiEATHENF.
    OrthoDBiEOG7QNVZ1.
    PhylomeDBiQ10356.

    Family and domain databases

    Gene3Di3.40.50.880. 1 hit.
    InterProiIPR029062. Class_I_gatase-like.
    IPR002818. ThiJ/PfpI.
    [Graphical view]
    PfamiPF01965. DJ-1_PfpI. 1 hit.
    [Graphical view]
    SUPFAMiSSF52317. SSF52317. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q10356-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVKVCLFVAD GTDEIEFSAP WGIFKRAEIP IDSVYVGENK DRLVKMSRDV    50
    EMYANRSYKE IPSADDFAKQ YDIAIIPGGG LGAKTLSTTP FVQQVVKEFY 100
    KKPNKWIGMI CAGTLTAKTS GLPNKQITGH PSVRGQLEEG GYKYLDQPVV 150
    LEENLITSQG PGTAMLFGLK LLEQVASKDK YNAVYKSLSM P 191
    Length:191
    Mass (Da):21,078
    Last modified:October 1, 1996 - v1
    Checksum:i909817B8D554AB2E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU329670 Genomic DNA. Translation: CAA93890.1.
    PIRiT38160.
    RefSeqiNP_594829.1. NM_001020258.2.

    Genome annotation databases

    EnsemblFungiiSPAC22E12.03c.1; SPAC22E12.03c.1:pep; SPAC22E12.03c.
    GeneIDi2541772.
    KEGGispo:SPAC22E12.03c.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU329670 Genomic DNA. Translation: CAA93890.1 .
    PIRi T38160.
    RefSeqi NP_594829.1. NM_001020258.2.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4GDH X-ray 1.05 A/B/C/D 1-191 [» ]
    4GE0 X-ray 1.45 A/B/C/D 1-191 [» ]
    4GE3 X-ray 1.50 A/B/C/D 1-191 [» ]
    ProteinModelPortali Q10356.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    MINTi MINT-4699059.
    STRINGi 4896.SPAC22E12.03c-1.

    Proteomic databases

    MaxQBi Q10356.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii SPAC22E12.03c.1 ; SPAC22E12.03c.1:pep ; SPAC22E12.03c .
    GeneIDi 2541772.
    KEGGi spo:SPAC22E12.03c.

    Organism-specific databases

    PomBasei SPAC22E12.03c.

    Phylogenomic databases

    eggNOGi COG0693.
    HOGENOMi HOG000063194.
    OMAi EATHENF.
    OrthoDBi EOG7QNVZ1.
    PhylomeDBi Q10356.

    Miscellaneous databases

    NextBioi 20802863.
    PROi Q10356.

    Family and domain databases

    Gene3Di 3.40.50.880. 1 hit.
    InterProi IPR029062. Class_I_gatase-like.
    IPR002818. ThiJ/PfpI.
    [Graphical view ]
    Pfami PF01965. DJ-1_PfpI. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52317. SSF52317. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Schizosaccharomyces pombe."
      Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
      , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
      Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 972 / ATCC 24843.

    Entry informationi

    Entry nameiYDB3_SCHPO
    AccessioniPrimary (citable) accession number: Q10356
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1996
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 83 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Peptidase families
      Classification of peptidase families and list of entries
    3. Schizosaccharomyces pombe
      Schizosaccharomyces pombe: entries and gene names
    4. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3