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Protein

Ribosome biogenesis protein rlp24

Gene

rlp24

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of nog1 to pre-60S particles (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processRibosome biogenesis

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosome biogenesis protein rlp24
Gene namesi
Name:rlp24
Synonyms:rpl2403
ORF Names:SPAC22E12.13c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC22E12.13c
PomBaseiSPAC22E12.13c rlp24

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001369081 – 192Ribosome biogenesis protein rlp24Add BLAST192

Proteomic databases

MaxQBiQ10353
PaxDbiQ10353
PRIDEiQ10353

Interactioni

Subunit structurei

Associated with nucleolar and cytoplasmic pre-60S particles. At the end of biogenesis it dissociates from cytoplasmic pre-60S particles and is likely to be exchanged for its ribosomal homologue, rpl24 (By similarity).By similarity

Protein-protein interaction databases

STRINGi4896.SPAC22E12.13c.1

Structurei

3D structure databases

ProteinModelPortaliQ10353
SMRiQ10353
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000184344
InParanoidiQ10353
KOiK02896
OrthoDBiEOG092C5LTS
PhylomeDBiQ10353

Family and domain databases

CDDicd00472 Ribosomal_L24e_L24, 1 hit
Gene3Di2.30.170.20, 1 hit
InterProiView protein in InterPro
IPR038630 L24e/L24_sf
IPR000988 Ribosomal_L24e-rel
IPR023442 Ribosomal_L24e_CS
IPR011017 TRASH_dom
PANTHERiPTHR10792 PTHR10792, 1 hit
PfamiView protein in Pfam
PF01246 Ribosomal_L24e, 1 hit
SMARTiView protein in SMART
SM00746 TRASH, 1 hit
PROSITEiView protein in PROSITE
PS01073 RIBOSOMAL_L24E, 1 hit

Sequencei

Sequence statusi: Complete.

Q10353-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVHTCYFCS GPVYPGHGIM FVRNDSKVFR FCRSKCHKNF KMKRNPRKVA
60 70 80 90 100
WTKAYRKAHG KEMVYDTALA VTAARRNVPV RYDRNVIATT LNAMKRVSQV
110 120 130 140 150
HAKRERLFYK KRLAGKRAQE LQEAQKLIAQ NVPQFTEPEG EVETAEVQEP
160 170 180 190
QIVSDEEYTM EEEVAEPVKI PVLAKKRKNK KSRNSSSAMQ MD
Length:192
Mass (Da):22,280
Last modified:October 1, 1996 - v1
Checksum:iAE4BD226780373D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA Translation: CAA93900.1
PIRiT38170
RefSeqiNP_594839.1, NM_001020268.2

Genome annotation databases

EnsemblFungiiSPAC22E12.13c.1; SPAC22E12.13c.1:pep; SPAC22E12.13c
GeneIDi2541855
KEGGispo:SPAC22E12.13c

Similar proteinsi

Entry informationi

Entry nameiRLP24_SCHPO
AccessioniPrimary (citable) accession number: Q10353
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: April 25, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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