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Q10343 (YL28_SCHPO) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein C1556.08c
Gene names
ORF Names:SPAC1556.08c, SPAC1F12.01c
OrganismSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifier284812 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces

Protein attributes

Sequence length334 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the 5'-AMP-activated protein kinase gamma subunit family.

Contains 4 CBS domains.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 334334Uncharacterized protein C1556.08c
PRO_0000204390

Regions

Domain29 – 8961CBS 1
Domain115 – 17763CBS 2
Domain187 – 24761CBS 3
Domain262 – 31958CBS 4

Secondary structure

1 ................................................... 334
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q10343 [UniParc].

Last modified August 14, 2001. Version 2.
Checksum: 8D32CC6CE53F7916

FASTA33437,427
        10         20         30         40         50         60 
MTDVQETQKG ALKEIQAFIR SRTSYDVLPT SFRLIVFDVT LFVKTSLSLL TLNNIVSAPL 

        70         80         90        100        110        120 
WDSEANKFAG LLTMADFVNV IKYYYQSSSF PEAIAEIDKF RLLGLREVER KIGAIPPETI 

       130        140        150        160        170        180 
YVHPMHSLMD ACLAMSKSRA RRIPLIDVDG ETGSEMIVSV LTQYRILKFI SMNCKETAML 

       190        200        210        220        230        240 
RVPLNQMTIG TWSNLATASM ETKVYDVIKM LAEKNISAVP IVNSEGTLLN VYESVDVMHL 

       250        260        270        280        290        300 
IQDGDYSNLD LSVGEALLKR PANFDGVHTC RATDRLDGIF DAIKHSRVHR LFVVDENLKL 

       310        320        330 
EGILSLADIL NYIIYDKTTT PGVPEQTDNF ESAV

« Hide

References

[1]"The genome sequence of Schizosaccharomyces pombe."
Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. expand/collapse author list , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
Nature 415:871-880(2002) [PubMed: 11859360] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 972 / ATCC 24843.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU329670 Genomic DNA. Translation: CAB61219.1.
PIRS67444. T38059.
T50087.
RefSeqXP_001713093.1. XM_001713041.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2OOXX-ray2.60E/G3-334[»]
2OOYX-ray2.88E/G3-334[»]
2QR1X-ray2.70E/G3-334[»]
2QRCX-ray2.70E/G3-334[»]
2QRDX-ray2.41E/G3-334[»]
2QREX-ray3.01E/G3-334[»]
ProteinModelPortalQ10343.
SMRQ10343. Positions 3-334.
ModBaseSearch...

Protein-protein interaction databases

DIPDIP-29522N.
IntActQ10343. 1 interaction.
STRINGQ10343.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiSPAC1556.08c.1; SPAC1556.08c.1:pep; SPAC1556.08c.
GeneID5802929.
KEGGspo:SPAC1556.08c.

Organism-specific databases

GeneDB_SpombeSPAC1556.08c.

Phylogenomic databases

eggNOGfuNOG07696.
GeneTreeEFGT00050000005694.
HOGENOMHBG446629.
OMAIQYYFQN.
OrthoDBEOG4SR15D.

Enzyme and pathway databases

BioCycSPOM-XXX-01:SPOM-XXX-01-003108-MONOMER.

Gene expression databases

ArrayExpressQ10343.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR000644. Cysta_beta_synth_core.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
PfamPF00571. CBS. 2 hits.
[Graphical view]
SMARTSM00116. CBS. 4 hits.
[Graphical view]
PROSITEPS51371. CBS. 4 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYL28_SCHPO
AccessionPrimary (citable) accession number: Q10343
Secondary accession number(s): Q9UTJ1
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: August 14, 2001
Last modified: December 14, 2011
This is version 67 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Schizosaccharomyces pombe

Schizosaccharomyces pombe: entries and gene names

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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