Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Probable U3 small nucleolar RNA-associated protein 11

Gene

utp11

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Involved in nucleolar processing of pre-18S ribosomal RNA.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

rRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Probable U3 small nucleolar RNA-associated protein 11
Short name:
U3 snoRNA-associated protein 11
Gene namesi
Name:utp11
ORF Names:SPAC18G6.06
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC18G6.06.
PomBaseiSPAC18G6.06. utp11.

Subcellular locationi

GO - Cellular componenti

  • mitotic spindle Source: PomBase
  • nucleolus Source: PomBase
  • nucleus Source: PomBase
  • small-subunit processome Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 249249Probable U3 small nucleolar RNA-associated protein 11PRO_0000211051Add
BLAST

Proteomic databases

MaxQBiQ10106.

Interactioni

Subunit structurei

Component of the ribosomal small subunit (SSU) processome.By similarity

Protein-protein interaction databases

BioGridi278610. 5 interactions.
MINTiMINT-4696964.

Family & Domainsi

Sequence similaritiesi

Belongs to the UTP11 family.Curated

Phylogenomic databases

HOGENOMiHOG000231076.
InParanoidiQ10106.
KOiK14769.
OMAiSNDEHHE.
OrthoDBiEOG7HB5P3.
PhylomeDBiQ10106.

Family and domain databases

InterProiIPR007144. SSU_processome_Utp11.
[Graphical view]
PANTHERiPTHR12838. PTHR12838. 1 hit.
PfamiPF03998. Utp11. 1 hit.
[Graphical view]
PIRSFiPIRSF015952. U3snoRNP11. 1 hit.

Sequencei

Sequence statusi: Complete.

Q10106-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSFKNAGQ RKNHRERAQP FERRKWGLLE KRKDYAQRAQ DYKTKQKKLK
60 70 80 90 100
RLREKALERN PDEFYHEMTH KKTKNGVPLE QREDSTIDMD TIKILKTQDI
110 120 130 140 150
GWIRHHRNVE RAKIDHLEQQ MHTVGAHRNK NESRKHTIFV DNVKEAKSFN
160 170 180 190 200
PAEFFQTTDD LVGRTENRVK KDQIENNELT NQPFSGKLHS KLKEKAATEL
210 220 230 240
LLRQKRDKKL AAAEERVELD RLLQGKGGRQ KKKVVNGKPV YKWRNERKR
Length:249
Mass (Da):29,683
Last modified:February 1, 1996 - v1
Checksum:iBACC2A1BF4AB9A74
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAA92386.1.
PIRiT37920.
RefSeqiNP_593670.1. NM_001019102.2.

Genome annotation databases

EnsemblFungiiSPAC18G6.06.1; SPAC18G6.06.1:pep; SPAC18G6.06.
GeneIDi2542134.
KEGGispo:SPAC18G6.06.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAA92386.1.
PIRiT37920.
RefSeqiNP_593670.1. NM_001019102.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi278610. 5 interactions.
MINTiMINT-4696964.

Proteomic databases

MaxQBiQ10106.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC18G6.06.1; SPAC18G6.06.1:pep; SPAC18G6.06.
GeneIDi2542134.
KEGGispo:SPAC18G6.06.

Organism-specific databases

EuPathDBiFungiDB:SPAC18G6.06.
PomBaseiSPAC18G6.06. utp11.

Phylogenomic databases

HOGENOMiHOG000231076.
InParanoidiQ10106.
KOiK14769.
OMAiSNDEHHE.
OrthoDBiEOG7HB5P3.
PhylomeDBiQ10106.

Miscellaneous databases

NextBioi20803206.
PROiQ10106.

Family and domain databases

InterProiIPR007144. SSU_processome_Utp11.
[Graphical view]
PANTHERiPTHR12838. PTHR12838. 1 hit.
PfamiPF03998. Utp11. 1 hit.
[Graphical view]
PIRSFiPIRSF015952. U3snoRNP11. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.

Entry informationi

Entry nameiUTP11_SCHPO
AccessioniPrimary (citable) accession number: Q10106
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: May 11, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.