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Protein

Probable U3 small nucleolar RNA-associated protein 11

Gene

utp11

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Involved in nucleolar processing of pre-18S ribosomal RNA.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processrRNA processing

Enzyme and pathway databases

ReactomeiR-SPO-6791226 Major pathway of rRNA processing in the nucleolus and cytosol

Names & Taxonomyi

Protein namesi
Recommended name:
Probable U3 small nucleolar RNA-associated protein 11
Short name:
U3 snoRNA-associated protein 11
Gene namesi
Name:utp11
ORF Names:SPAC18G6.06
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC18G6.06
PomBaseiSPAC18G6.06 utp11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002110511 – 249Probable U3 small nucleolar RNA-associated protein 11Add BLAST249

Proteomic databases

MaxQBiQ10106
PaxDbiQ10106
PRIDEiQ10106

Interactioni

Subunit structurei

Component of the ribosomal small subunit (SSU) processome.By similarity

Protein-protein interaction databases

BioGridi278610, 5 interactors
STRINGi4896.SPAC18G6.06.1

Structurei

3D structure databases

SMRiQ10106
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UTP11 family.Curated

Phylogenomic databases

HOGENOMiHOG000231076
InParanoidiQ10106
KOiK14769
OMAiERQKQYN
OrthoDBiEOG092C46VR
PhylomeDBiQ10106

Family and domain databases

InterProiView protein in InterPro
IPR007144 SSU_processome_Utp11
PANTHERiPTHR12838 PTHR12838, 1 hit
PfamiView protein in Pfam
PF03998 Utp11, 1 hit
PIRSFiPIRSF015952 U3snoRNP11, 1 hit

Sequencei

Sequence statusi: Complete.

Q10106-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSFKNAGQ RKNHRERAQP FERRKWGLLE KRKDYAQRAQ DYKTKQKKLK
60 70 80 90 100
RLREKALERN PDEFYHEMTH KKTKNGVPLE QREDSTIDMD TIKILKTQDI
110 120 130 140 150
GWIRHHRNVE RAKIDHLEQQ MHTVGAHRNK NESRKHTIFV DNVKEAKSFN
160 170 180 190 200
PAEFFQTTDD LVGRTENRVK KDQIENNELT NQPFSGKLHS KLKEKAATEL
210 220 230 240
LLRQKRDKKL AAAEERVELD RLLQGKGGRQ KKKVVNGKPV YKWRNERKR
Length:249
Mass (Da):29,683
Last modified:February 1, 1996 - v1
Checksum:iBACC2A1BF4AB9A74
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA Translation: CAA92386.1
PIRiT37920
RefSeqiNP_593670.1, NM_001019102.2

Genome annotation databases

EnsemblFungiiSPAC18G6.06.1; SPAC18G6.06.1:pep; SPAC18G6.06
GeneIDi2542134
KEGGispo:SPAC18G6.06

Similar proteinsi

Entry informationi

Entry nameiUTP11_SCHPO
AccessioniPrimary (citable) accession number: Q10106
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: May 23, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
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