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Q0ZJ13 (ATPB_VITVI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
ATP synthase subunit beta, chloroplastic
EC=3.6.3.14
Alternative name(s):
ATP synthase F1 sector subunit beta
F-ATPase subunit beta
Gene names
Name:atpB
Encoded onPlastid; Chloroplast
OrganismVitis vinifera (Grape) [Reference proteome]
Taxonomic identifier29760 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › Vitales › Vitaceae › Vitis

Protein attributes

Sequence length498 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits By similarity. HAMAP-Rule MF_01347

Catalytic activity

ATP + H2O + H+(In) = ADP + phosphate + H+(Out). HAMAP-Rule MF_01347

Subunit structure

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has four main subunits: a1, b1, b'1 and c(9-12) By similarity.

Subcellular location

Plastid › chloroplast thylakoid membrane; Peripheral membrane protein By similarity HAMAP-Rule MF_01347.

Sequence similarities

Belongs to the ATPase alpha/beta chains family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 498498ATP synthase subunit beta, chloroplastic HAMAP-Rule MF_01347
PRO_0000254531

Regions

Nucleotide binding172 – 1798ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
Q0ZJ13 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: E7E39222B7EE72B7

FASTA49853,743
        10         20         30         40         50         60 
MRINPTTSGP GVSTLEKKNL GRIAQIIGPV LDVAFPPGKM PNIYNALVVK GRDTVGQQIN 

        70         80         90        100        110        120 
VTCEVQQLLG NNRVRAVAMS ATDGLMRGME VIDTGAPLSV PVGGATLGRI FNVLGEPVDN 

       130        140        150        160        170        180 
LGPVDTRTTS PIHRSAPAFI QLDTKLSIFE TGIKVVDLLA PYRRGGKIGL FGGAGVGKTV 

       190        200        210        220        230        240 
LIMELINNIA KAHGGVSVFG GVGERTREGN DLYMEMKESG VINEKNISES KVALVYGQMN 

       250        260        270        280        290        300 
EPPGARMRVG LTALTMAEYF RDVNEQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP 

       310        320        330        340        350        360 
TLSTEMGTLQ ERITSTKEGS ITSIQAVYVP ADDLTDPAPA TTFAHLDATT VLSRGLAAKG 

       370        380        390        400        410        420 
IYPAVDPLDS TSTMLQPRIV GEEHYETAQR VKQTLQRYKE LQDIIAILGL DELSEEDRLT 

       430        440        450        460        470        480 
VARARKIERF LSQPFFVAEV FTGSPGKYVG LAETIRGFQL ILSGELDGLP EQAFYLVGNI 

       490 
DEATAKAMNL EMESKLKK

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References

[1]"Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids."
Jansen R.K., Kaittanis C., Lee S.-B., Saski C., Tomkins J., Alverson A.J., Daniell H.
BMC Evol. Biol. 6:32-32(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Maxxa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DQ424856 Genomic DNA. Translation: ABE47541.1.
RefSeqYP_567083.1. NC_007957.1.

3D structure databases

ProteinModelPortalQ0ZJ13.
SMRQ0ZJ13. Positions 19-485.
ModBaseSearch...

Proteomic databases

PRIDEQ0ZJ13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4025008.
KEGGvvi:4025008.

Phylogenomic databases

eggNOGCOG0055.
KOK02112.
ProtClustDBCHL00060.

Family and domain databases

Gene3D1.10.1140.10. 1 hit.
HAMAPMF_01347. ATP_synth_beta_bact.
InterProIPR003593. AAA+_ATPase.
IPR020003. ATPase_a/bsu_AS.
IPR004100. ATPase_a/bsu_N.
IPR005722. ATPase_F1-cplx_bsu.
IPR000793. ATPase_F1/V1/A1-cplx_a/bsu_C.
IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
IPR024034. ATPase_F1_bsu/V1_C.
[Graphical view]
PANTHERPTHR15184:SF8. PTHR15184:SF8. 1 hit.
PfamPF00006. ATP-synt_ab. 1 hit.
PF00306. ATP-synt_ab_C. 1 hit.
PF02874. ATP-synt_ab_N. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF47917. ATPase_a/b_C. 1 hit.
SSF50615. ATPase_a/b_N. 1 hit.
TIGRFAMsTIGR01039. atpD. 1 hit.
PROSITEPS00152. ATPASE_ALPHA_BETA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameATPB_VITVI
AccessionPrimary (citable) accession number: Q0ZJ13
Entry history
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: August 22, 2006
Last modified: May 1, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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