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Protein
Submitted name:

Chemotaxis signal transducer

Gene

tlpC

Organism
Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciUMET351160:GJT4-2570-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Chemotaxis signal transducerImported
Gene namesi
Name:tlpCImported
ORF Names:RCIX191Imported
OrganismiMethanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50)Imported
Taxonomic identifieri351160 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanocellalesMethanocellaceaeMethanocella
ProteomesiUP000000663 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi351160.RCIX191.

Structurei

3D structure databases

ProteinModelPortaliQ0W7G8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
KOiK03406.
OMAiKSTERIN.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 2 hits.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00229. sensory_box. 2 hits.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0W7G8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPIGWIWEE QDVWAMLTSI MAIMTGGISR NGAGRMNSAY YEKILSYIPD
60 70 80 90 100
PIMVRDADRN IIYANKAAFA LTGRGEHEGF KCDRFMCNNI PAGYCDSSCP
110 120 130 140 150
IEKAYRSGQK EVIQDVKLKN AHGDVMYGQL TAIVMTDDKG NFVGGMEIIR
160 170 180 190 200
DTTAQRKEEL AAKEQAEHIR NLIKEIPASL IISDNNHVVT HASNGFSAFT
210 220 230 240 250
GKSVDEMIGK KIKDVLGVKS DTVLDIVIDT HKSVLNEERK IPTGKGQFQP
260 270 280 290 300
VLISAIPVKD AKGNYIGGIE LIQNIQALKD KENEIKAQLE YNSRMSARLI
310 320 330 340 350
SGIEAIASGD LNVVLAKERD DDFGRTIDAY NHLVNDLKAL ILEVKANADE
360 370 380 390 400
TRIKAKEIAD SAEQMSTSIQ QVAAASNEIS QGSENLARLS EEASQRVRET
410 420 430 440 450
NLLFKKLTDN ATKSASLANE GAKKAKEVGN EAANVSSGMK NIRIAVSETT
460 470 480 490 500
EVVSGLNNAV KEIGKVTDTI KSIADQTNLL ALNAAIEAAR AGEHGRGFAV
510 520 530 540 550
VAEEVRKLAD ESRKSTERIN NLIENVQHET DRVMQSIDKV TAESSEGEQV
560 570 580 590 600
ITGAMTKIQD VVASVDLINA VSSEVSDDVK KGSAALDSIA KSIESAAATA
610 620 630 640 650
EETASSSEET SAAIEEQTAA VEELNASTQV LSDVSENTYK LLSEKFKIEL
660
PAGAGSAGSQ KKRMHA
Length:666
Mass (Da):71,937
Last modified:September 5, 2006 - v1
Checksum:iDC3A845116FB5DC1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM114193 Genomic DNA. Translation: CAJ35675.1.
RefSeqiWP_012036824.1. NC_009464.1.
YP_685001.1. NC_009464.1.

Genome annotation databases

EnsemblBacteriaiCAJ35675; CAJ35675; RCIX191.
GeneIDi5145648.
KEGGirci:RCIX191.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM114193 Genomic DNA. Translation: CAJ35675.1.
RefSeqiWP_012036824.1. NC_009464.1.
YP_685001.1. NC_009464.1.

3D structure databases

ProteinModelPortaliQ0W7G8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi351160.RCIX191.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ35675; CAJ35675; RCIX191.
GeneIDi5145648.
KEGGirci:RCIX191.

Phylogenomic databases

eggNOGiCOG0840.
KOiK03406.
OMAiKSTERIN.

Enzyme and pathway databases

BioCyciUMET351160:GJT4-2570-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 2 hits.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00229. sensory_box. 2 hits.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome of rice cluster I archaea -- the key methane producers in the rice rhizosphere."
    Erkel C., Kube M., Reinhardt R., Liesack W.
    Science 313:370-372(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MRE50Imported.

Entry informationi

Entry nameiQ0W7G8_METAR
AccessioniPrimary (citable) accession number: Q0W7G8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: July 22, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.