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Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase (RuBisCO),large subunit

Gene

rbcL

Organism
Uncultured methanogenic archaeon RC-I
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciUMET351160:GJT4-2545-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase (RuBisCO),large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Name:rbcLImported
Ordered Locus Names:UNCMA_24810Imported
ORF Names:RCIX222Imported
OrganismiUncultured methanogenic archaeon RC-IImported
Taxonomic identifieri351160 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanocellalesMethanocellaceaeMethanocella
ProteomesiUP000000663: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi351160.RCIX222.

Structurei

3D structure databases

ProteinModelPortaliQ0W7E3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230832.
KOiK01601.
OMAiMSIFKGV.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0W7E3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIHGDKDLI IQVPLTLINI MTMVRTTYYV EADAPIAKVA KEIAAEQSTG
60 70 80 90 100
TWTEVAAEKE VHEKLGAHVV SAEGNTVVID FPVEIFEPDN VPQILSVVAG
110 120 130 140 150
NLFGLGGLKA CRLMDVDFGP LTKYYNGPEF GIEEVRKILG VYDRPLVGTI
160 170 180 190 200
IKPKVGLSPK RTAEVAEQAA LGGLDLIKDD ETLTDQKFCP LEERLTMVMD
210 220 230 240 250
RLHKVEDRIG KPCFYAVNVT CGADMIVERA ERAVELGANM VMVDILTAGF
260 270 280 290 300
SAVQALTDEK IGVPIHIHRT MHGALTRGKY GIAMPVISKL TRMCGGTNLH
310 320 330 340 350
TGTYAGKMER NVCEIDASRD ILRKPWAGYK RVWPVSSGGL YPQKVRENLD
360 370 380 390 400
CYGIDVILQA GGGIHGHPEG TTVGVKAMFQ AVEAWQQQKT LEEYAKTHKE
410
LAGALKQWGP SQ
Length:412
Mass (Da):45,052
Last modified:September 5, 2006 - v1
Checksum:i57B5005ACB55BC30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM114193 Genomic DNA. Translation: CAJ35700.1.
RefSeqiYP_685026.1. NC_009464.1.

Genome annotation databases

EnsemblBacteriaiCAJ35700; CAJ35700; RCIX222.
GeneIDi5144247.
KEGGirci:RCIX222.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM114193 Genomic DNA. Translation: CAJ35700.1.
RefSeqiYP_685026.1. NC_009464.1.

3D structure databases

ProteinModelPortaliQ0W7E3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi351160.RCIX222.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ35700; CAJ35700; RCIX222.
GeneIDi5144247.
KEGGirci:RCIX222.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230832.
KOiK01601.
OMAiMSIFKGV.

Enzyme and pathway databases

BioCyciUMET351160:GJT4-2545-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome of rice cluster I archaea -- the key methane producers in the rice rhizosphere."
    Erkel C., Kube M., Reinhardt R., Liesack W.
    Science 313:370-372(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MRE50Imported.

Entry informationi

Entry nameiQ0W7E3_UNCMA
AccessioniPrimary (citable) accession number: Q0W7E3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: January 7, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.