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Protein
Submitted name:

Methanocella arvoryzae MRE50 complete genome

Gene

RCIX1657

Organism
Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciUMET351160:GJT4-1379-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methanocella arvoryzae MRE50 complete genomeImported
Gene namesi
ORF Names:RCIX1657Imported
OrganismiMethanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50)Imported
Taxonomic identifieri351160 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanocellalesMethanocellaceaeMethanocella
ProteomesiUP000000663 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi351160.RCIX1657.

Structurei

3D structure databases

ProteinModelPortaliQ0W405.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000271843.
OMAiRTADVRW.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0W405-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPFRIFNSVR KYLSNETEYT CLPGDKTMAS PDYSNKATSK MREGLNAIRQ
60 70 80 90 100
INDSVKLLSL NARIEAARAG ASGKTFAVVA EEMKTLSDRV QVIAEKLDSE
110 120 130 140 150
ITITEQEISA TETQARGNRL SDLAFNAIEV LDRNLYERTA DVRWWATEAA
160 170 180 190 200
FVDACRSSGD EHRRRVAVSR MGVILKNYTI YKELILADVN GRIIANGKPD
210 220 230 240 250
RYSLCDTDVS GRSWFQGAMA TSTGNEYFVQ DVEKCPLTGD LAVIYSAAVR
260 270 280 290 300
EGGETYGKVI GVLAVVFDWA QADYIVKNVR LSEEEKKNSR ILLFNRDGYV
310 320 330 340 350
IASSDGKGIL AENVAGLEGV RRALKGEKGF TIETADRKKI MVAFARTPGY
360
ETYRGLGWGC AILSPT
Length:366
Mass (Da):40,499
Last modified:September 5, 2006 - v1
Checksum:i690DCBEACC967610
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM114193 Genomic DNA. Translation: CAJ36888.1.
RefSeqiWP_012035675.1. NC_009464.1.
YP_686214.1. NC_009464.1.

Genome annotation databases

EnsemblBacteriaiCAJ36888; CAJ36888; RCIX1657.
GeneIDi5145230.
KEGGirci:RCIX1657.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM114193 Genomic DNA. Translation: CAJ36888.1.
RefSeqiWP_012035675.1. NC_009464.1.
YP_686214.1. NC_009464.1.

3D structure databases

ProteinModelPortaliQ0W405.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi351160.RCIX1657.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ36888; CAJ36888; RCIX1657.
GeneIDi5145230.
KEGGirci:RCIX1657.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000271843.
OMAiRTADVRW.

Enzyme and pathway databases

BioCyciUMET351160:GJT4-1379-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome of rice cluster I archaea -- the key methane producers in the rice rhizosphere."
    Erkel C., Kube M., Reinhardt R., Liesack W.
    Science 313:370-372(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MRE50Imported.

Entry informationi

Entry nameiQ0W405_METAR
AccessioniPrimary (citable) accession number: Q0W405
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: June 24, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.