Q0W3M2 (Q0W3M2_UNCMA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A HAMAP MF_00170
EC=5.3.1.6 HAMAP MF_00170

Alternative name(s):
Phosphoriboisomerase A HAMAP MF_00170

Gene names

Name:	rpi EMBL CAJ37021.1
Synonyms:	rpiA HAMAP MF_00170
Ordered Locus Names:	UNCMA_12190
ORF Names:	RCIX1835 EMBL CAJ37021.1

Organism

Uncultured methanogenic archaeon RC-I [Complete proteome] [HAMAP] EMBL CAJ37021.1

Taxonomic identifier

351160 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › environmental samples

Protein attributes

Sequence length	234 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family. HAMAP MF_00170

Ontologies

Keywords
Molecular function	Isomerase HAMAP MF_00170 EMBL CAJ37021.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0W3M2 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: B2CD557DAF1193A0	FASTA	234	24,612
	10 20 30 40 50 60 MASMKNLSGS DAAKKNAAEK ACELVTDGMI VGLGTGSTVA HSIRLLGRWV KEEGLNIVGV 70 80 90 100 110 120 PTSYSTEALA IECGIPLTSL AASPVLDIAI DGADQVDASL NAIKGGGAAH TREKIVASSA 130 140 150 160 170 180 KQFVIVADDK KFSSILDRSV PTEVLPYAVK LVEREILKLG GTCTVRTGTG KDGPIITDNG 190 200 210 220 230 NFVLDCAFGQ IKEPALLGDK LSRIPGLVEH GIFTNAAMVY VGYENRVEVL RRKM

References

[1]	"Genome of rice cluster I archaea -- the key methane producers in the rice rhizosphere." Erkel C., Kube M., Reinhardt R., Liesack W. Science 313:370-372(2006) [PubMed: 16857943] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM114193 Genomic DNA. Translation: CAJ37021.1.
RefSeq	YP_686347.1. NC_009464.1.
3D structure databases
ProteinModelPortal	Q0W3M2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0W3M2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5144295.
GenomeReviews	Gene locus UNCMA_12190 in contig AM114193_GR.
KEGG	rci:RCIX1835.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG07879.
HOGENOM	HBG515603.
OMA	CLAERVR.
PhylomeDB	Q0W3M2.
ProtClustDB	PRK00702.
Enzyme and pathway databases
BioCyc	UMET351160:RCIX1835-MONOMER.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. IPR014036. Tscrpt_reg_HTH_DeoR. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF00455. DeoR. 1 hit. PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0W3M2_UNCMA

Accession

Primary (citable) accession number: Q0W3M2

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)