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Protein
Submitted name:

Methanocella arvoryzae MRE50 complete genome

Gene

RRC337

Organism
Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciUMET351160:GJT4-217-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methanocella arvoryzae MRE50 complete genomeImported
Gene namesi
ORF Names:RRC337Imported
OrganismiMethanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50)Imported
Taxonomic identifieri351160 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanocellalesMethanocellaceaeMethanocella
ProteomesiUP000000663 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi351160.RRC337.

Structurei

3D structure databases

ProteinModelPortaliQ0W0N6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0478.
HOGENOMiHOG000225685.
KOiK07179.
OMAiHREGYTN.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011009. Kinase-like_dom.
IPR030484. Rio2.
IPR015285. RIO2_wHTH_N.
IPR018934. RIO_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR10593:SF1. PTHR10593:SF1. 1 hit.
PfamiPF01163. RIO1. 1 hit.
PF09202. Rio2_N. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.

Sequencei

Sequence statusi: Complete.

Q0W0N6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIDHAAVYLA LVPNEKKVLR GVEEGMKRHE WVPVEDIEAY AGLGRKEVEY
60 70 80 90 100
RLNRLVDMKI VERYIQSYAG YQLKFDGYDI LAIDAFVKKE TFGALGEVIG
110 120 130 140 150
VGKESVVLAA MSHKPVAVKF HREGRTSFKQ VKRSRQHLVD IEIVNFSWLY
160 170 180 190 200
AAMLAAKREF EAMKILYPAV SIPEPIDQNR HAIVMSVVKG IEMAKATLVD
210 220 230 240 250
PEWYLDSVIE QVKKAYELGI IHSDLSEFNI MVSDEGLTII DWPQYVKVGS
260 270 280 290
KTAEEMLERD VRNVLTHFEK KYRIRRDLQS TIGYIKGKES GKQS
Length:294
Mass (Da):33,653
Last modified:September 5, 2006 - v1
Checksum:iC8639FF512CFD41B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM114193 Genomic DNA. Translation: CAJ38057.1.
RefSeqiWP_012034538.1. NC_009464.1.
YP_687383.1. NC_009464.1.

Genome annotation databases

EnsemblBacteriaiCAJ38057; CAJ38057; RRC337.
GeneIDi5142880.
KEGGirci:RRC337.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM114193 Genomic DNA. Translation: CAJ38057.1.
RefSeqiWP_012034538.1. NC_009464.1.
YP_687383.1. NC_009464.1.

3D structure databases

ProteinModelPortaliQ0W0N6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi351160.RRC337.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ38057; CAJ38057; RRC337.
GeneIDi5142880.
KEGGirci:RRC337.

Phylogenomic databases

eggNOGiCOG0478.
HOGENOMiHOG000225685.
KOiK07179.
OMAiHREGYTN.

Enzyme and pathway databases

BioCyciUMET351160:GJT4-217-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011009. Kinase-like_dom.
IPR030484. Rio2.
IPR015285. RIO2_wHTH_N.
IPR018934. RIO_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR10593:SF1. PTHR10593:SF1. 1 hit.
PfamiPF01163. RIO1. 1 hit.
PF09202. Rio2_N. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome of rice cluster I archaea -- the key methane producers in the rice rhizosphere."
    Erkel C., Kube M., Reinhardt R., Liesack W.
    Science 313:370-372(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MRE50Imported.

Entry informationi

Entry nameiQ0W0N6_METAR
AccessioniPrimary (citable) accession number: Q0W0N6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: June 24, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.