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Protein

Putative methyl-accepting chemotaxis AlkN

Gene

ABO_0106

Organism
Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation.By similarity

Pathwayi: alkane degradation

This protein is involved in the pathway alkane degradation, which is part of Hydrocarbon metabolism.
View all proteins of this organism that are known to be involved in the pathway alkane degradation and in Hydrocarbon metabolism.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Transducer

Enzyme and pathway databases

UniPathwayiUPA00191.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative methyl-accepting chemotaxis AlkN
Gene namesi
Ordered Locus Names:ABO_0106
OrganismiAlcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)
Taxonomic identifieri393595 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesAlcanivoracaceaeAlcanivorax
Proteomesi
  • UP000008871 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei24 – 44HelicalSequence analysisAdd BLAST21
Transmembranei303 – 323HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003922211 – 675Putative methyl-accepting chemotaxis AlkNAdd BLAST675

Proteomic databases

PRIDEiQ0VTI9.

Interactioni

Protein-protein interaction databases

STRINGi393595.ABO_0106.

Structurei

3D structure databases

ProteinModelPortaliQ0VTI9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini343 – 394HAMPPROSITE-ProRule annotationAdd BLAST52
Domaini399 – 635Methyl-accepting transducerPROSITE-ProRule annotationAdd BLAST237

Sequence similaritiesi

Contains 1 HAMP domain.PROSITE-ProRule annotation
Contains 1 methyl-accepting transducer domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000220189.
KOiK02660.
OMAiQATIHGM.
OrthoDBiPOG091H0QRR.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR029095. NarX-like_N.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF13675. PilJ. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0VTI9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKFNSGALFE KLRGGAGEGN TLNIALYVGL AIFIVLALAN FLLSATTANK
60 70 80 90 100
AQENITRASE MRVISQQIAK NALEAAAGNA DAFELLDKSQ KGFQSAWNAV
110 120 130 140 150
KDEQVSDPEA MARLQTLWDE VNANADVILK GEDTVLDLHE VADTLAQTIP
160 170 180 190 200
SLQAEYEGVV EILVTTDAAP EQIAFAQRQS WLAERIVRSI AKVLEGGDGA
210 220 230 240 250
VIAADSFGRD ASLFGRIMNG MIEGDAAMGI DQVNDPDALD YLAEIADLFD
260 270 280 290 300
EFVNQSVDEI LETAPELFQV RNAADTIFRR SQDLLEESTN LNNQFENTTS
310 320 330 340 350
GLFPSVWLGG VSAGLAVLFF FIIMAQRNRQ AAKLKDELES ENQRNQAAIL
360 370 380 390 400
RLLDELGDLA DGDLTVQATV TEDFTGAIAD SINYSIDQLR NLVQTINNSA
410 420 430 440 450
VQVASAAQET QSTAMHLAEA SEHQAQEIAG ASAAVNEMAV SIDQVSANAA
460 470 480 490 500
ESAAVAERAV AIANKGAEVV QATIHGMDTI REQIQETSKR IKRLGESSQE
510 520 530 540 550
IGDIVSLIND IADQTNILAL NAAIQASMAG EAGRGFAVVA DEVQRLAERS
560 570 580 590 600
AAATKQIETL VKTIQTDTNE AVISMEATTA EVVKGARLAQ DAGVALEEIE
610 620 630 640 650
SVSKTLADLI QNISNAARQQ AASAGHISNT MNVIQEITSQ TSAGTTATAR
660 670
SIGNLAEMAQ DMRNSVAGFR LPEHS
Length:675
Mass (Da):71,939
Last modified:September 5, 2006 - v1
Checksum:i6F2B26654CB33037
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM286690 Genomic DNA. Translation: CAL15554.1.
RefSeqiWP_011587404.1. NC_008260.1.

Genome annotation databases

EnsemblBacteriaiCAL15554; CAL15554; ABO_0106.
KEGGiabo:ABO_0106.
PATRICi20837789. VBIAlcBor124741_0112.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM286690 Genomic DNA. Translation: CAL15554.1.
RefSeqiWP_011587404.1. NC_008260.1.

3D structure databases

ProteinModelPortaliQ0VTI9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi393595.ABO_0106.

Proteomic databases

PRIDEiQ0VTI9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAL15554; CAL15554; ABO_0106.
KEGGiabo:ABO_0106.
PATRICi20837789. VBIAlcBor124741_0112.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000220189.
KOiK02660.
OMAiQATIHGM.
OrthoDBiPOG091H0QRR.

Enzyme and pathway databases

UniPathwayiUPA00191.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR029095. NarX-like_N.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF13675. PilJ. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiALKN_ALCBS
AccessioniPrimary (citable) accession number: Q0VTI9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 23, 2010
Last sequence update: September 5, 2006
Last modified: November 2, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.