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Reviewed, UniProtKB/Swiss-Prot Q0VTD7 (HEM6_ALCBS)

Last modified November 3, 2009. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Coproporphyrinogen-III oxidase, aerobic
      Short name=Coproporphyrinogenase
      Short name=Coprogen oxidase
    EC=1.3.3.3
Gene names
Name: hemF
Ordered Locus Names: ABO_0135
OrganismAlcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) [Complete proteome] [HAMAP]
Taxonomic identifier393595 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesAlcanivoracaceaeAlcanivorax

Protein attributes

Sequence length302 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Catalytic activity

Coproporphyrinogen-III + O2 + 2 H+ = protoporphyrinogen-IX + 2 CO2 + 2 H2O. HAMAP MF_00333

Pathway

Porphyrin metabolism; protoporphyrin-IX biosynthesis; protoporphyrinogen-IX from coproporphyrinogen-III (O2 route): step 1/1. HAMAP MF_00333

Subcellular location

Cytoplasm By similarity.

Sequence similarities

Belongs to the aerobic coproporphyrinogen-III oxidase family.

Ontologies

Keywords
   Biological processPorphyrin biosynthesis
   Cellular componentCytoplasm
   Molecular functionOxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processoxidation reduction

Inferred from electronic annotation. Source: UniProtKB-KW

porphyrin biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functioncoproporphyrinogen oxidase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 302302Coproporphyrinogen-III oxidase, aerobic HAMAP MF_00333
PRO_1000119784

Sequences

Sequence LengthMass (Da)Tools
Q0VTD7-1 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: 8B2F3DBF3A58E31F

FASTA30234,744
        10         20         30         40         50         60 
MSEVSLQAVK DYLLDLQDRI CDALGAEDGA ATFREDSWER EQGGGGRSRV LENGAVIEKG 

        70         80         90        100        110        120 
GVNFSHVFGE QLPPSATEAR PELAGRSFQA MGVSLVIHPK NPYVPTSHAN VRFFVAEKEG 

       130        140        150        160        170        180 
EAPVWWFGGG FDLTPYYGFE EDVVHWHQTA KVACQPFGKE IYPEFKTWCD DYFYLKHRNE 

       190        200        210        220        230        240 
PRGVGGLFFD DLNRFDFDTS FALMRSIGDA YVPAYQPILA RRKDHEFGDR ERQFQLYRRG 

       250        260        270        280        290        300 
RYVEFNLVYD RGTIFGLQSG GRTESILMSL PPLVRWDYDY HPEPNSAESE LYHKFLIHRE 


WV 

« Hide

Cross-references

Sequence databases

AM286690 Genomic DNA. Translation: CAL15583.1.
RefSeqYP_691855.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ0VTD7.

Genome annotation databases

GeneID4213624.
GenomeReviewsGene locus ABO_0135 in contig AM286690_GR.
KEGGabo:ABO_0135.
NMPDRfig|393595.12.peg.134.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ0VTD7.
OMAVKAYLLD.

Enzyme and pathway databases

BioCycABOR393595:ABO_0135-MON.

Family and domain databases

HAMAPMF_00333.
[Tree]
InterProIPR001260. Coprogen_oxidas.
IPR018375. Coproporphyrinogen-3_ox_CS.
[Graphical view]
Gene3DG3DSA:3.40.1500.10. Coprogen_oxidas. 1 hit.
PANTHERPTHR10755. Coprogen_oxidas. 1 hit.
PfamPF01218. Coprogen_oxidas. 1 hit.
[Graphical view]
PIRSFPIRSF000166. Coproporphyri_ox. 1 hit.
PRINTSPR00073. COPRGNOXDASE.
PROSITEPS01021. COPROGEN_OXIDASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameHEM6_ALCBS
AccessionPrimary (citable) accession number: Q0VTD7
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 5, 2006
Last modified: November 3, 2009
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents