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Q0VQ19 (Q0VQ19_ALCBS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Isocitrate dehydrogenase (NADP-dependent) EMBL CAL16729.1
EC=1.1.1.42 EMBL CAL16729.1
Gene names
Name:icd EMBL CAL16729.1
Ordered Locus Names:ABO_1281
OrganismAlcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) [Complete proteome] [HAMAP] EMBL CAL16729.1
Taxonomic identifier393595 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Alcanivoracaceae › Alcanivorax ›

Protein attributes

Sequence length740 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region132 – 1398Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3501Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5481Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5521Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1451Substrate By similarity PIRSR PIRSR009407-2
Binding site5471Substrate By similarity PIRSR PIRSR009407-2
Site2551Critical for catalysis By similarity PIRSR PIRSR009407-1
Site4201Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
Q0VQ19 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: E93E9721F03991CC

FASTA74082,598
        10         20         30         40         50         60 
MTTPKIIYTM TDEAPALATY SFLPIIEKFT SIAGIEVESS DISLATRILA SFPEYLSEQQ 

        70         80         90        100        110        120 
KVKDTLSELS DLTQDPEANI IKLPNISASI PQLREAIAEL NEHGYAVPEY PDEPQNEKEK 

       130        140        150        160        170        180 
DIQARYTKIL GSAVNPVLRE GNSDRRAPIA VKNYARKNPH SMGYWSPASR THVAHMRGGD 

       190        200        210        220        230        240 
FFSHETSCTI DKACKVRIEF EDSNGNITVK KPDLALLDGE VIDAMYMSKK ALCAFFDEQI 

       250        260        270        280        290        300 
EDAKNTGMLF SLHVKATMMK VSHPIVFGHA VRCFYRELFE KHGEILEKIG ANPNNGLSNI 

       310        320        330        340        350        360 
YQKIEELPIS QRLEIESTIR ACYLHRPELA MVDSDRGISN LHVPSDVIVD ASMPAMIRQG 

       370        380        390        400        410        420 
GKMYGADGKL KDTKAVIPES TYATIYQEVI NFCKTHGAFD PVTCGSVPNV GLMAQKAEEY 

       430        440        450        460        470        480 
GSHDKTFEAT ADGSMRIVRE DGEVLLTHKV EQGDIWRMCQ AKDLPIRDWV KLAVVRARLS 

       490        500        510        520        530        540 
NTPAIFWLDK ERAHDAQLIL KVKEYLKDHD TEGLDIRIMS PVQAIRYTME RMIRGKDTIS 

       550        560        570        580        590        600 
VTGNVLRDYL TDLFPILELG TSAKMLSIVP LMAGGGLYET GAGGSAPKHV QQFLEENHLR 

       610        620        630        640        650        660 
WDSLGEFLAL SVSIQELGEK YGNKKAKVIA AALDKANEQY LEQNKSPSRK VGQPDNRVSH 

       670        680        690        700        710        720 
FYVAMYWAQA LAAQDDDAEL KEKFTEIASS LSQNEEKIVK EMVAVQGSPI DIGGYYNPDF 

       730        740 
NKASQAMRPS GTFNQILEKL

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM286690 Genomic DNA. Translation: CAL16729.1.
RefSeqYP_693001.1. NC_008260.1.

3D structure databases

ProteinModelPortalQ0VQ19.
SMRQ0VQ19. Positions 3-740.
ModBaseSearch...

Protein-protein interaction databases

STRING393595.ABO_1281.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAL16729; CAL16729; ABO_1281.
GeneID4211344.
KEGGabo:ABO_1281.
PATRIC20840317. VBIAlcBor124741_1345.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2838.
HOGENOMHOG000240860.
KOK00031.
OMAPRTMGTV.
ProtClustDBCLSK867411.

Enzyme and pathway databases

BioCycABOR393595:GHRI-1282-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ0VQ19_ALCBS
AccessionPrimary (citable) accession number: Q0VQ19
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: May 1, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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