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Q0VMD7 (PSD_ALCBS) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphatidylserine decarboxylase proenzyme
EC=4.1.1.65

Cleaved into the following 2 chains:

  1. Phosphatidylserine decarboxylase alpha chain
  2. Phosphatidylserine decarboxylase beta chain
Gene names
Name:psd
Ordered Locus Names:ABO_2213
OrganismAlcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) [Complete proteome] [HAMAP]
Taxonomic identifier393595 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Alcanivoracaceae › Alcanivorax

Protein attributes

Sequence length291 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphatidyl-L-serine = phosphatidylethanolamine + CO2. HAMAP MF_00662

Cofactor

Pyruvoyl group By similarity. HAMAP MF_00662

Pathway

Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from CDP-diacylglycerol: step 2/2. HAMAP MF_00662

Sequence similarities

Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily.

Ontologies

Keywords
   Biological processPhospholipid biosynthesis
   LigandPyruvate
   Molecular functionDecarboxylase
Lyase
   PTMZymogen
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processphospholipid biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionphosphatidylserine decarboxylase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 252252Phosphatidylserine decarboxylase beta chain By similarity
PRO_0000262089
Chain253 – 29139Phosphatidylserine decarboxylase alpha chain By similarity
PRO_0000262090

Sites

Site252 – 2532Cleavage (non-hydrolytic) By similarity

Amino acid modifications

Modified residue2531Pyruvic acid (Ser) By similarity

Sequences

Sequence LengthMass (Da)Tools
Q0VMD7 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: 1B32816A56727AA0

FASTA29132,065
        10         20         30         40         50         60 
MSLRDKLFVT LQYLIPQHAL SRLVGILARS EVPWIKTTFI NMFMKRFGID LSEAQIEDAD 

        70         80         90        100        110        120 
QFPTFNAFFT RALKADARPL EASESNDIAS PADGAVSQLG AIRANQVFQA KGHDYSLYDL 

       130        140        150        160        170        180 
LGGDSALASE FTNGQFATVY LSPRDYHRVH MPFTGTLRET RYVPGDLFSV NEATANGVPN 

       190        200        210        220        230        240 
LFARNERLVC IFDTEQGPMA VILVGAMIVA GIETVFSGQV TPLPKQVVTT DYLRSKPIAL 

       250        260        270        280        290 
EKGEELGRFL LGSTVVMLFP EGKAKFAPNL KPGSQVRVRG KLGAYTNENK H

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM286690 Genomic DNA. Translation: CAL17661.1.
RefSeqYP_693933.1. NC_008260.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ0VMD7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4211226.
GenomeReviewsGene locus ABO_2213 in contig AM286690_GR.
KEGGabo:ABO_2213.
NMPDRfig|393595.12.peg.2212.
PATRIC20842295. VBIAlcBor124741_2316.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0688.
HOGENOMHBG302256.
OMAMCQSEAR.
PhylomeDBQ0VMD7.

Enzyme and pathway databases

BioCycABOR393595:ABO_2213-MONOMER.

Family and domain databases

HAMAPMF_00662. PS_decarb_type1.
[Tree]
InterProIPR003817. PS_Dcarbxylase.
IPR005221. PS_decarb.
[Graphical view]
KOK01613.
PANTHERPTHR10067. PS_decarb. 1 hit.
PfamPF02666. PS_Dcarbxylase. 1 hit.
[Graphical view]
TIGRFAMsTIGR00163. PS_decarb. 1 hit.
ProtoNetSearch...

Entry information

Entry namePSD_ALCBS
AccessionPrimary (citable) accession number: Q0VMD7
Entry history
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: September 5, 2006
Last modified: January 25, 2012
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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