Q0VM92 (Q0VM92_ALCBS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Proline iminopeptidase RuleBase RU003421
EC=3.4.11.5 RuleBase RU003421

Gene names

Name:	pip EMBL CAL17706.1
Ordered Locus Names:	ABO_2257

Organism

Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) [Complete proteome] [HAMAP]

Taxonomic identifier

393595 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Alcanivoracaceae › Alcanivorax

Protein attributes

Sequence length	307 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Release of N-terminal proline from a peptide. RuleBase RU003421
Sequence similarities	Belongs to the peptidase S33 family. RuleBase RU003421

Ontologies

Keywords
Molecular function	Aminopeptidase RuleBase RU003421 EMBL CAL17706.1 Hydrolase Protease
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	aminopeptidase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	109	1	Nucleophile By similarity PIRSR PIRSR006431-1
	Active site	255	1	By similarity PIRSR PIRSR006431-1
	Active site	283	1	Proton donor By similarity PIRSR PIRSR006431-1

Sequences

	Sequence		Length	Mass (Da)
	Q0VM92 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: CA3D9A3FC827EA8F	FASTA	307	34,124
	10 20 30 40 50 60 MALFPYLDAN RQFYLPVGEG HQLYVEESGN PQGSPVVVLH GGPGGGCSPA LRRFFDPQKF 70 80 90 100 110 120 RMILFDQRGS GQSRPLGSID NNTLSHLLLD LEKIRQALHI ERWMVFGGSW GATLALAYLA 130 140 150 160 170 180 AFPQYITAMV LRGIFLCRER DLDWLYTSKG AARLFPEAWQ ALEQQAPPGS GHLLERYYQG 190 200 210 220 230 240 LQGDDAHRYA RAWCNWESTL ALMPTQPPGA GSDGELCMAR QETHYFLAGG FIERPLLEVC 250 260 270 280 290 300 AGSQVPVEIV HGRRDFVCPP EQALALHQVL PNSELNWVDR GGHSSMDPGV AQALVNAVTR LDRRAKQ

References

[1]

"Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis." Schneiker S., Martins dos Santos V.A.P., Bartels D., Bekel T., Brecht M., Buhrmester J., Chernikova T.N., Denaro R., Ferrer M., Gertler C., Goesmann A., Golyshina O.V., Kaminski F., Khachane A.N., Lang S., Linke B., McHardy A.C., Meyer F. , Nechitaylo T., Puehler A., Regenhardt D., Rupp O., Sabirova J.S., Selbitschka W., Yakimov M.M., Timmis K.N., Vorhoelter F.-J., Weidner S., Kaiser O., Golyshin P.N. Nat. Biotechnol. 24:997-1004(2006) [PubMed: 16878126] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM286690 Genomic DNA. Translation: CAL17706.1.
RefSeq	YP_693977.1. NC_008260.1.
3D structure databases
ProteinModelPortal	Q0VM92.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0VM92.
Protein family/group databases
MEROPS	S33.001.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4211388.
GenomeReviews	Gene locus ABO_2257 in contig AM286690_GR.
KEGG	abo:ABO_2257.
NMPDR	fig|393595.12.peg.2258.
PATRIC	20842387. VBIAlcBor124741_2362.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0596.
HOGENOM	HBG677789.
OMA	CAPVMAR.
Family and domain databases
InterPro	IPR005944. Pept_S33. IPR002410. Peptidase_S33. [Graphical view]
KO	K01259.
PANTHER	PTHR10992:SF12. PTHR10992:SF12. 1 hit.
PIRSF	PIRSF006431. Pept_S33. 1 hit.
PRINTS	PR00793. PROAMNOPTASE.
TIGRFAMs	TIGR01249. Pro_imino_pep_1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0VM92_ALCBS

Accession

Primary (citable) accession number: Q0VM92

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)