ID   DAPF_ALCBS              Reviewed;         281 AA.
AC   Q0VM18;
DT   15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT   05-SEP-2006, sequence version 1.
DT   16-JUN-2009, entry version 24.
DE   RecName: Full=Diaminopimelate epimerase;
DE            Short=DAP epimerase;
DE            EC=5.1.1.7;
GN   Name=dapF; OrderedLocusNames=ABO_2332;
OS   Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
OC   Alcanivoracaceae; Alcanivorax.
OX   NCBI_TaxID=393595;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=16878126; DOI=10.1038/nbt1232;
RA   Schneiker S., Martins dos Santos V.A.P., Bartels D., Bekel T.,
RA   Brecht M., Buhrmester J., Chernikova T.N., Denaro R., Ferrer M.,
RA   Gertler C., Goesmann A., Golyshina O.V., Kaminski F., Khachane A.N.,
RA   Lang S., Linke B., McHardy A.C., Meyer F., Nechitaylo T., Puehler A.,
RA   Regenhardt D., Rupp O., Sabirova J.S., Selbitschka W., Yakimov M.M.,
RA   Timmis K.N., Vorhoelter F.-J., Weidner S., Kaiser O., Golyshin P.N.;
RT   "Genome sequence of the ubiquitous hydrocarbon-degrading marine
RT   bacterium Alcanivorax borkumensis.";
RL   Nat. Biotechnol. 24:997-1004(2006).
CC   -!- CATALYTIC ACTIVITY: LL-2,6-diaminoheptanedioate = meso-
CC       diaminoheptanedioate.
CC   -!- PATHWAY: Amino-acid biosynthesis; L-lysine biosynthesis via DAP
CC       pathway; DL-diaminopimelate from LL-diaminopimelate: step 1/1.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm (By similarity).
CC   -!- SIMILARITY: Belongs to the diaminopimelate epimerase family.
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DR   EMBL; AM286690; CAL17780.1; -; Genomic_DNA.
DR   RefSeq; YP_694052.1; -.
DR   GeneID; 4213290; -.
DR   GenomeReviews; AM286690_GR; ABO_2332.
DR   KEGG; abo:ABO_2332; -.
DR   NMPDR; fig|393595.12.peg.2333; -.
DR   HOGENOM; Q0VM18; -.
DR   OMA; Q0VM18; PHAVLRV.
DR   BioCyc; ABOR393595:ABO_2332-MON; -.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0008837; F:diaminopimelate epimerase activity; IEA:HAMAP.
DR   GO; GO:0009089; P:lysine biosynthetic process via diaminopime...; IEA:HAMAP.
DR   HAMAP; MF_00197; -; 1.
DR   InterPro; IPR001653; DAP_epimerase.
DR   InterPro; IPR018510; DAP_epimerase_CS.
DR   Pfam; PF01678; DAP_epimerase; 2.
DR   TIGRFAMs; TIGR00652; DapF; 1.
DR   PROSITE; PS01326; DAP_EPIMERASE; 1.
PE   3: Inferred from homology;
KW   Amino-acid biosynthesis; Complete proteome; Cytoplasm; Isomerase;
KW   Lysine biosynthesis.
FT   CHAIN         1    281       Diaminopimelate epimerase.
FT                                /FTId=PRO_1000011831.
FT   ACT_SITE     79     79       By similarity.
FT   ACT_SITE    223    223       By similarity.
SQ   SEQUENCE   281 AA;  30363 MW;  05F53C8683062678 CRC64;
     MNLRFTKMHG LGNDFMVIDG IRQSLPETGL PLPADEIRRL ADRKFGVGFD QMLIVQPAQG
     DADFRYRILN ADGSEVSQCG NGARCFARFV REQGLTDKKS IRVETAAGQM TLSVTDDDQI
     TVDMGAPRWA PDAIPMTAKA EADNYFLVSG TQAWDVGAVG LGNPHCTLLV ENVDTAPVDT
     VGPLLESHEQ FPERANVGFM QIVSRNEIRL RVYERGAGET LACGSGACAA VVIGQRRDWL
     DDTVTVHLPG GTLHVCYDGQ GGIQMTGPAS HVYDGAIEIA L
//