Q0VLA6 (GCST_ALCBS) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 40.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Aminomethyltransferase EC=2.1.2.10 Alternative name(s): Glycine cleavage system T protein | ||||
| Gene names |
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| Organism | Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 393595 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Alcanivoracaceae › Alcanivorax |
Protein attributes
| Sequence length | 359 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | The glycine cleavage system catalyzes the degradation of glycine By similarity. HAMAP MF_00259 |
| Catalytic activity | [Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3. HAMAP MF_00259 |
| Subunit structure | The glycine cleavage system is composed of four proteins: P, T, L and H By similarity. |
| Sequence similarities | Belongs to the GcvT family. |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Aminotransferase Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | glycine catabolic process Inferred from electronic annotation. Source: InterPro |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: InterPro |
| Molecular function | aminomethyltransferase activity Inferred from electronic annotation. Source: EC transaminase activityInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 359 | 359 | Aminomethyltransferase HAMAP MF_00259 | PRO_1000047643 | |||
Sequences
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References
| [1] | "Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis." Schneiker S., Martins dos Santos V.A.P., Bartels D., Bekel T., Brecht M., Buhrmester J., Chernikova T.N., Denaro R., Ferrer M., Gertler C., Goesmann A., Golyshina O.V., Kaminski F., Khachane A.N., Lang S., Linke B., McHardy A.C., Meyer F. Golyshin P.N.Nat. Biotechnol. 24:997-1004(2006) [PubMed: 16878126] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SK2 / ATCC 700651 / DSM 11573. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AM286690 Genomic DNA. Translation: CAL18042.1. |
| RefSeq | YP_694314.1. NC_008260.1. |
3D structure databases | |
| ProteinModelPortal | Q0VLA6. |
| SMR | Q0VLA6. Positions 4-355. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q0VLA6. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4211692. |
| GenomeReviews | Gene locus ABO_2594 in contig AM286690_GR. |
| KEGG | abo:ABO_2594. |
| NMPDR | fig|393595.12.peg.2598. |
| PATRIC | 20843081. VBIAlcBor124741_2707. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0404. |
| HOGENOM | HBG299834. |
| OMA | KALYGGM. |
| PhylomeDB | Q0VLA6. |
Enzyme and pathway databases | |
| BioCyc | ABOR393595:ABO_2594-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00259. GcvT. [Tree] |
| InterPro | IPR013977. GCV_T_C. IPR006222. GCV_T_N. IPR006223. GcvT. IPR022903. NH2_Me_Trfase. [Graphical view] |
| KO | K00605. |
| PANTHER | PTHR13847:SF5. PTHR13847:SF5. 1 hit. |
| Pfam | PF01571. GCV_T. 1 hit. PF08669. GCV_T_C. 1 hit. [Graphical view] |
| PIRSF | PIRSF006487. GcvT. 1 hit. |
| TIGRFAMs | TIGR00528. GcvT. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | GCST_ALCBS | ||||||||
| Accession | Primary (citable) accession number: Q0VLA6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

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