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Protein
Submitted name:

Puf60 protein

Gene

Puf60

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Puf60 proteinImported
Gene namesi
Name:Puf60Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1915209. Puf60.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 121RRM (RNA recognition motif)InterPro annotationAdd BLAST79
Domaini140 – 218RRM (RNA recognition motif)InterPro annotationAdd BLAST79

Phylogenomic databases

eggNOGiKOG0124. Eukaryota.
ENOG410XSGH. LUCA.
HOVERGENiHBG055622.

Family and domain databases

CDDicd12370. RRM1_PUF60. 1 hit.
cd12371. RRM2_PUF60. 1 hit.
InterProiView protein in InterPro
IPR006532. PolyU-bd.
IPR034209. PUF60_RRM1.
IPR034211. PUF60_RRM2.
IPR000504. RRM_dom.
PANTHERiPTHR24012:SF668. PTHR24012:SF668. 1 hit.
PfamiView protein in Pfam
PF00076. RRM_1. 2 hits.
SMARTiView protein in SMART
SM00360. RRM. 2 hits.
SUPFAMiSSF54928. SSF54928. 2 hits.
TIGRFAMsiTIGR01645. half-pint. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 2 hits.

Sequencei

Sequence statusi: Fragment.

Q0VDY2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
EQPQQQQQLT NLQMAAVTMG FGDPLSPLQS MAAQRQRALA IMCRVYVGSI
60 70 80 90 100
YYELGEDTIR QAFAPFGPIK SIDMSWDSVT MKHKGFAFVE YEVPEAAQLA
110 120 130 140 150
LEQMNSVMLG GRNIKVGRPS NIGQAQPIID QLAEEARAFN RIYVASVHQD
160 170 180 190 200
LSDDDIKSVF EAFGKIKSCT LARDPTTGKH KGYGFIEYEK AQSSQDAVSS
210 220 230 240
MNLFDLGGQY LRVGKAVTPP MPLLTPATPG GLPPAAAVVV H
Length:241
Mass (Da):26,281
Last modified:September 5, 2006 - v1
Checksum:iE3AB053E2C3EBE4E
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei241Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC119437 mRNA. Translation: AAI19438.1.
BC148274 mRNA. Translation: AAI48275.1.
UniGeneiMm.29965.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ0VDY2_MOUSE
AccessioniPrimary (citable) accession number: Q0VDY2
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: July 5, 2017
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)