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Protein

Solute carrier family 25 member 40

Gene

SLC25A40

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Solute carrier family 25 member 40
Gene namesi
Name:SLC25A40
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Unplaced

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei19 – 39Helical; Name=1Sequence analysisAdd BLAST21
Transmembranei103 – 123Helical; Name=2Sequence analysisAdd BLAST21
Transmembranei145 – 165Helical; Name=3Sequence analysisAdd BLAST21
Transmembranei199 – 220Helical; Name=4Sequence analysisAdd BLAST22
Transmembranei239 – 259Helical; Name=5Sequence analysisAdd BLAST21
Transmembranei298 – 318Helical; Name=6Sequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, Mitochondrion, Mitochondrion inner membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002918081 – 338Solute carrier family 25 member 40Add BLAST338

Proteomic databases

PRIDEiQ0VCH6.

Structurei

3D structure databases

ProteinModelPortaliQ0VCH6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati13 – 131Solcar 1Add BLAST119
Repeati139 – 223Solcar 2Add BLAST85
Repeati233 – 327Solcar 3Add BLAST95

Sequence similaritiesi

Contains 3 Solcar repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000214473.
HOVERGENiHBG011439.
InParanoidiQ0VCH6.
KOiK15119.

Family and domain databases

Gene3Di1.50.40.10. 1 hit.
InterProiIPR002067. Mit_carrier.
IPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom.
[Graphical view]
PfamiPF00153. Mito_carr. 3 hits.
[Graphical view]
PRINTSiPR00926. MITOCARRIER.
SUPFAMiSSF103506. SSF103506. 2 hits.
PROSITEiPS50920. SOLCAR. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0VCH6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPESEGPAV ITVTPLQQMF ASCTGAILTS LMVTPFDVVK IRLQAQNNPF
60 70 80 90 100
PKGKCFLYSN GLMDHLCVCE EEGNKAWYKK PGHFQGTLDA FLKIIRNEGI
110 120 130 140 150
KSLWSGLPPT LVMAVPATVI YFTCYDQLTA LLRSKLGENE SRIPIVAGIV
160 170 180 190 200
ARLGAVTVIS PLELIRTKMQ SKKFSYEELH RFVSKKVSED GWISLWRGWA
210 220 230 240 250
PTILRDVPFS AMYWYNYEVL KKWLCAKSGL YEPTFMINFT SGALSGSFAA
260 270 280 290 300
VVTLPFDVVK TQKQTQLWIY ESQKISMPLQ MSTWTIMKNI VAKNGFSGLF
310 320 330
TGLIPRLIKI APACAVMIST YEFGKSFFQK QNAQRQRY
Length:338
Mass (Da):38,110
Last modified:September 5, 2006 - v1
Checksum:iB71E440EBA181D40
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC120163 mRNA. Translation: AAI20164.1.
RefSeqiNP_001069767.1. NM_001076299.3.
UniGeneiBt.104946.

Genome annotation databases

GeneIDi613948.
KEGGibta:613948.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC120163 mRNA. Translation: AAI20164.1.
RefSeqiNP_001069767.1. NM_001076299.3.
UniGeneiBt.104946.

3D structure databases

ProteinModelPortaliQ0VCH6.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ0VCH6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi613948.
KEGGibta:613948.

Organism-specific databases

CTDi55972.

Phylogenomic databases

HOGENOMiHOG000214473.
HOVERGENiHBG011439.
InParanoidiQ0VCH6.
KOiK15119.

Family and domain databases

Gene3Di1.50.40.10. 1 hit.
InterProiIPR002067. Mit_carrier.
IPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom.
[Graphical view]
PfamiPF00153. Mito_carr. 3 hits.
[Graphical view]
PRINTSiPR00926. MITOCARRIER.
SUPFAMiSSF103506. SSF103506. 2 hits.
PROSITEiPS50920. SOLCAR. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiS2540_BOVIN
AccessioniPrimary (citable) accession number: Q0VCH6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: September 5, 2006
Last modified: November 30, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.