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Protein

Protein mago nashi homolog 2

Gene

MAGOHB

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Involved in mRNA splicing and in the nonsense-mediated decay (NMD) pathway.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

mRNA processing, mRNA splicing, mRNA transport, Transport

Keywords - Ligandi

RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Protein mago nashi homolog 2
Gene namesi
Name:MAGOHB
Synonyms:MAGOH2
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 5

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 148147Protein mago nashi homolog 2PRO_0000323380Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanineBy similarity

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ0VC92.
PRIDEiQ0VC92.

Expressioni

Gene expression databases

BgeeiENSBTAG00000019235.

Interactioni

Subunit structurei

Interacts with RBM8A and is part of the exon junction complex (EJC).By similarity

Protein-protein interaction databases

IntActiQ0VC92. 2 interactions.
STRINGi9913.ENSBTAP00000025615.

Structurei

3D structure databases

ProteinModelPortaliQ0VC92.
SMRiQ0VC92. Positions 5-148.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the mago nashi family.Curated

Phylogenomic databases

eggNOGiKOG3392. Eukaryota.
ENOG4111FJ7. LUCA.
GeneTreeiENSGT00390000003156.
HOGENOMiHOG000207428.
HOVERGENiHBG004353.
InParanoidiQ0VC92.
KOiK12877.
OMAiKEDDTNW.
OrthoDBiEOG091G0UKA.
TreeFamiTF300128.

Family and domain databases

CDDicd11295. Mago_nashi. 1 hit.
Gene3Di3.30.1560.10. 1 hit.
InterProiIPR004023. Mago_nashi.
[Graphical view]
PANTHERiPTHR12638. PTHR12638. 1 hit.
PfamiPF02792. Mago_nashi. 1 hit.
[Graphical view]
SUPFAMiSSF89817. SSF89817. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q0VC92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMASDFYLR YYVGHKGKFG HEFLEFEFRP DGKLRYANNS NYKNDVMIRK
60 70 80 90 100
EAYVHKSVME ELKRIIDDSE ITKEDDALWP PPDRVGRQEL EIVIGDEHIS
110 120 130 140
FTTSKIGSLI DVNQSKDPEG LRVFYYLVQD LKCLVFSLIG LHFKIKPI
Length:148
Mass (Da):17,308
Last modified:September 5, 2006 - v1
Checksum:i0DDD3FD3ADD09E28
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC120291 mRNA. Translation: AAI20292.1.
RefSeqiNP_001069720.1. NM_001076252.1.
UniGeneiBt.22385.

Genome annotation databases

EnsembliENSBTAT00000025615; ENSBTAP00000025615; ENSBTAG00000019235.
GeneIDi541013.
KEGGibta:541013.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC120291 mRNA. Translation: AAI20292.1.
RefSeqiNP_001069720.1. NM_001076252.1.
UniGeneiBt.22385.

3D structure databases

ProteinModelPortaliQ0VC92.
SMRiQ0VC92. Positions 5-148.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ0VC92. 2 interactions.
STRINGi9913.ENSBTAP00000025615.

Proteomic databases

PaxDbiQ0VC92.
PRIDEiQ0VC92.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000025615; ENSBTAP00000025615; ENSBTAG00000019235.
GeneIDi541013.
KEGGibta:541013.

Organism-specific databases

CTDi55110.

Phylogenomic databases

eggNOGiKOG3392. Eukaryota.
ENOG4111FJ7. LUCA.
GeneTreeiENSGT00390000003156.
HOGENOMiHOG000207428.
HOVERGENiHBG004353.
InParanoidiQ0VC92.
KOiK12877.
OMAiKEDDTNW.
OrthoDBiEOG091G0UKA.
TreeFamiTF300128.

Gene expression databases

BgeeiENSBTAG00000019235.

Family and domain databases

CDDicd11295. Mago_nashi. 1 hit.
Gene3Di3.30.1560.10. 1 hit.
InterProiIPR004023. Mago_nashi.
[Graphical view]
PANTHERiPTHR12638. PTHR12638. 1 hit.
PfamiPF02792. Mago_nashi. 1 hit.
[Graphical view]
SUPFAMiSSF89817. SSF89817. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiMGN2_BOVIN
AccessioniPrimary (citable) accession number: Q0VC92
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: September 5, 2006
Last modified: September 7, 2016
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.