Unreviewed, UniProtKB/TrEMBL Q0VAN4 (Q0VAN4_HUMAN)

Names and origin

Protein names

Submitted name:
    C1q and tumor necrosis factor related protein 3 EMBL AAI20991.1
Submitted name:
    cDNA FLJ58190, highly similar to Homo sapiens C1q and tumor necrosis factor related protein 3 (C1QTNF3), transcript variant 2, mRNA EMBL BAG58744.1
    cDNA, FLJ78820, highly similar to Homo sapiens C1q and tumor necrosis factor related protein 3 (C1QTNF3), transcript variant 2, mRNA EMBL BAH14292.1
    CTRP3 variant B EMBL ABY86417.1

Gene names

Name:

C1QTNF3 EMBL AAI20991.1

Organism

Homo sapiens (Human) EMBL AAI20991.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	319 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 C1q domain. Spearmint SPM001073

Ontologies

Keywords
Domain	Collagen Spearmint SPM001073
Gene Ontology (GO)
Cellular component	extracellular region Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0VAN4-1 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: EC12962E5B726F00	FASTA	319	35,183
	10 20 30 40 50 60 MLWRQLIYWQ LLALFFLPFC LCQDEYMEVS GRTNKVVARI VQSHQQTGRS GSRREKVRER 70 80 90 100 110 120 SHPKTGTVDN NTSTDLKSLR PDELPHPEVD DLAQITTFWG QSPQTGGLPP DCSKCCHGDY 130 140 150 160 170 180 SFRGYQGPPG PPGPPGIPGN HGNNGNNGAT GHEGAKGEKG DKGDLGPRGE RGQHGPKGEK 190 200 210 220 230 240 GYPGIPPELQ IAFMASLATH FSNQNSGIIF SSVETNIGNF FDVMTGRFGA PVSGVYFFTF 250 260 270 280 290 300 SMMKHEDVEE VYVYLMHNGN TVFSMYSYEM KGKSDTSSNH AVLKLAKGDE VWLRMGNGAL 310 HGDHQRFSTF AGFLLFETK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: PCR rescued clones EMBL AAI20991.1.
[2]	"Alternative splicing of CTRP3/C1qTNF3 gene produces two protein isoforms." Wong G.W. Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"NEDO human cDNA sequencing project focused on splicing variants." Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. , Sugano S., Nomura N., Isogai T. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Substantia nigra EMBL BAG58744.1.
[4]	"NEDO human cDNA sequencing project." Wakamatsu A., Yamamoto J., Kimura K., Ishii S., Watanabe K., Sugiyama A., Murakawa K., Kaida T., Tsuchiya K., Fukuzumi Y., Kumagai A., Oishi Y., Yamamoto S., Ono Y., Komori Y., Yamazaki M., Kisu Y., Nishikawa T. , Sugano S., Nomura N., Isogai T. Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Cerebellum EMBL BAH14292.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BC120990 mRNA. Translation: AAI20991.1. EU399232 mRNA. Translation: ABY86417.1. AK295968 mRNA. Translation: BAG58744.1. AK315921 mRNA. Translation: BAH14292.1.
IPI	IPI00643667.
RefSeq	NP_852100.3.
UniGene	Hs.171929
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSG00000082196. Homo sapiens. [Contig view]
GeneID	114899.
Organism-specific databases
HGNC	HGNC:451. AMACR. HGNC:14326. C1QTNF3.
GenAtlas	Search...
Phylogenomic databases
HOVERGEN	Q0VAN4.
OMA	Q0VAN4. KVRERSH.
Gene expression databases
ArrayExpress	Q0VAN4.
Bgee	Q0VAN4.
Family and domain databases
InterPro	IPR001073. C1q. IPR008160. Collagen. IPR008983. Tumour_necrosis_fac-like. [Graphical view]
Gene3D	G3DSA:2.60.120.40. Tumour_necrosis_fac-like. 1 hit.
Pfam	PF00386. C1q. 1 hit. PF01391. Collagen. 1 hit. [Graphical view]
PRINTS	PR00007. COMPLEMNTC1Q.
SMART	SM00110. C1Q. 1 hit. [Graphical view]
PROSITE	PS50871. C1Q. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	79406.

Entry information

Entry name

Q0VAN4_HUMAN

Accession

Primary (citable) accession number: Q0VAN4

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	June 16, 2009
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)