Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Dynein, cytoplasmic 1, light intermediate chain 1

Gene

dync1li1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Dynein, cytoplasmic 1, light intermediate chain 1Imported
Gene namesi
Name:dync1li1Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Organism-specific databases

XenbaseiXB-GENE-490205. dync1li1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ0V9Y0.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000011775.

Structurei

3D structure databases

ProteinModelPortaliQ0V9Y0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3905. Eukaryota.
ENOG410XQS4. LUCA.
HOGENOMiHOG000236263.
HOVERGENiHBG005546.
KOiK10416.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR008467. Dynein1_light_intermed_chain.
IPR022780. Dynein_light_int_chain.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR12688. PTHR12688. 1 hit.
PfamiPF05783. DLIC. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.

Sequencei

Sequence statusi: Complete.

Q0V9Y0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATGRTGSYS SPSSSFNAGY GQNQSGATAS EDEDGQNLWS SILSEVSTRS
60 70 80 90 100
RSKLPSGKNV LLLGEDGAGK TSLIGKLQGI EEYKKGRGME YLYINVHDED
110 120 130 140 150
RDDQTRCNVW ILDGDLYHKG LLKFAMDPSS VRDTLIMLVV DMSRPWLALD
160 170 180 190 200
SLQKWASVIR EHVDKLKIPP EEMKEMEEKI VRNFQEYVEP GEEFPASPQK
210 220 230 240 250
RNTSSDEQDD SVILPLGEDT LTHNLGIPVV VVCTKCDAIS ILEKEHDYRD
260 270 280 290 300
EHFDFIQSHI RKFCLQYGAA LIYTSIKENK NIDIVYKYIV QQLYGFLFNM
310 320 330 340 350
PAVVVEKDAV FIPAGWDNDK KIGILHENFQ TLKPEDTFED IITKPPVRKF
360 370 380 390 400
VHEKEIVAED DQVFLMKQQS QLAKQPPAAA GRQDASPRVP GGSPRTPSRS
410 420 430 440 450
GSTNVASVSP VPTGTKKIDP NMKAGTTSEG VLANFFNSLL SKKTGSPGAG
460 470 480 490 500
GTGIPAGNST GNSLPASAKK TGQKPVLTDV QAELERISRK PDIVSPTTPT

SPTENDTS
Length:508
Mass (Da):55,867
Last modified:September 5, 2006 - v1
Checksum:i8890F384048FC2F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC121353 mRNA. Translation: AAI21354.1.
RefSeqiNP_001072301.1. NM_001078833.1.
UniGeneiStr.25888.

Genome annotation databases

GeneIDi779754.
KEGGixtr:779754.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC121353 mRNA. Translation: AAI21354.1.
RefSeqiNP_001072301.1. NM_001078833.1.
UniGeneiStr.25888.

3D structure databases

ProteinModelPortaliQ0V9Y0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000011775.

Proteomic databases

PaxDbiQ0V9Y0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi779754.
KEGGixtr:779754.

Organism-specific databases

CTDi51143.
XenbaseiXB-GENE-490205. dync1li1.

Phylogenomic databases

eggNOGiKOG3905. Eukaryota.
ENOG410XQS4. LUCA.
HOGENOMiHOG000236263.
HOVERGENiHBG005546.
KOiK10416.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR008467. Dynein1_light_intermed_chain.
IPR022780. Dynein_light_int_chain.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERiPTHR12688. PTHR12688. 1 hit.
PfamiPF05783. DLIC. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: TestesImported.

Entry informationi

Entry nameiQ0V9Y0_XENTR
AccessioniPrimary (citable) accession number: Q0V9Y0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: March 16, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.