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Q0UMS4

- Q0UMS4_PHANO

UniProt

Q0UMS4 - Q0UMS4_PHANO

Protein

DNA ligase

Gene

SNOG_06940

Organism
Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Septoria nodorum)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 2 (05 Feb 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:SNOG_06940Imported
    OrganismiPhaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Septoria nodorum)Imported
    Taxonomic identifieri321614 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePhaeosphaeriaceaeParastagonospora
    ProteomesiUP000001055: Unassembled WGS sequence

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    KOiK10747.
    OrthoDBiEOG7TXKRG.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 3 hits.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q0UMS4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAPKQATLGK FFGNPNANTS KQQSKLSFST KPKAQKIDAE IKDELESSTG    50
    DVKAEPASTA EEIEVKQETS GEAMELDSSS SETGKKRPAK EEEEEDSEDE 100
    PPMKRQRRKP SKDSEPSKKP KPAAKKSEKA SVKSNKQPTK VKAAVLEDDD 150
    DEVATTALAS KGKKITGKSP TPALPDYDGS AKEEEEETLS SDEEPEEMKK 200
    KAREKVQTAL KSNTKDPYPD WKAGDPVPYA ALCTTFSKIE MTTKRLEILA 250
    HCSLFLRQVL RLTPSDLLPT TLLMINKLAA DYTGVELGIG ESLIKKAISE 300
    STGRTLQHIN SDHNEIGDLG LVAAKSRSKQ PTMFKPKPLT IQGVHKGLLA 350
    IATIEGQGAQ GRKVDGIKKL LSAADSHNAG KHIDIEENKG GPSESKFIVR 400
    TLEGKLRLGL AERTVVVALA QAMIFHEMSQ NGKTPSTTDL GTAESILKTV 450
    YSELPSYEVI IPAMLEHGIL QLRENCRLQP GVPLKPMLAK PTKSITEVLD 500
    RFEGKDFTCE YKYDGERAQI HFVAHDADME MATTAPSAGK SDRGVSNIFS 550
    RNSEDLSKKY PDILAKLPTW IKEGTKSFVL DCETVAWDMV EKKVLPFQQL 600
    MTRKKEGFKV CVFAFDILYL NGEALVNKSF RERREHLQDA FIPILLEDSV 650
    KASCEGLMVK MLDGPESSYE PSKRSQNWLK VKKDYLAGVG DSLDLVVLGA 700
    YFGKGKRTSW YGAFLLACYN PNTQNYESVC NIGTGFSEAI LETLHEQLSE 750
    IVIDKPKPFY THSVGNKDQP DVWFEPRYVW EVKTADLTLS PRYRAAADEV 800
    SGGGKGISLR FPRFIKERDD KKPDQASTSK MIAEMYQRQE SVSKTKGPSA 850
    DDDFEY 856
    Length:856
    Mass (Da):94,806
    Last modified:February 5, 2008 - v2
    Checksum:iCAD1185A69AB8B3D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH445334 Genomic DNA. Translation: EAT85591.2.
    RefSeqiXP_001797300.1. XM_001797248.1.

    Genome annotation databases

    EnsemblFungiiSNOT_06940; SNOT_06940; SNOG_06940.
    GeneIDi5974190.
    KEGGipno:SNOG_06940.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH445334 Genomic DNA. Translation: EAT85591.2 .
    RefSeqi XP_001797300.1. XM_001797248.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii SNOT_06940 ; SNOT_06940 ; SNOG_06940 .
    GeneIDi 5974190.
    KEGGi pno:SNOG_06940.

    Phylogenomic databases

    KOi K10747.
    OrthoDBi EOG7TXKRG.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 3 hits.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Dothideomycete-plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum."
      Hane J.K., Lowe R.G.T., Solomon P.S., Tan K.-C., Schoch C.L., Spatafora J.W., Crous P.W., Kodira C.D., Birren B.W., Galagan J.E., Torriani S.F.F., McDonald B.A., Oliver R.P.
      Plant Cell 19:3347-3368(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SN15 / ATCC MYA-4574 / FGSC 10173Imported.

    Entry informationi

    Entry nameiQ0UMS4_PHANO
    AccessioniPrimary (citable) accession number: Q0UMS4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2006
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 54 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3