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Q0UMS4

- Q0UMS4_PHANO

UniProt

Q0UMS4 - Q0UMS4_PHANO

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Protein
DNA ligase
Gene
SNOG_06940
Organism
Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Septoria nodorum)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:SNOG_06940Imported
OrganismiPhaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Septoria nodorum)
Taxonomic identifieri321614 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePhaeosphaeriaceaeParastagonospora
ProteomesiUP000001055: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10747.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 3 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0UMS4-1 [UniParc]FASTAAdd to Basket

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MAPKQATLGK FFGNPNANTS KQQSKLSFST KPKAQKIDAE IKDELESSTG    50
DVKAEPASTA EEIEVKQETS GEAMELDSSS SETGKKRPAK EEEEEDSEDE 100
PPMKRQRRKP SKDSEPSKKP KPAAKKSEKA SVKSNKQPTK VKAAVLEDDD 150
DEVATTALAS KGKKITGKSP TPALPDYDGS AKEEEEETLS SDEEPEEMKK 200
KAREKVQTAL KSNTKDPYPD WKAGDPVPYA ALCTTFSKIE MTTKRLEILA 250
HCSLFLRQVL RLTPSDLLPT TLLMINKLAA DYTGVELGIG ESLIKKAISE 300
STGRTLQHIN SDHNEIGDLG LVAAKSRSKQ PTMFKPKPLT IQGVHKGLLA 350
IATIEGQGAQ GRKVDGIKKL LSAADSHNAG KHIDIEENKG GPSESKFIVR 400
TLEGKLRLGL AERTVVVALA QAMIFHEMSQ NGKTPSTTDL GTAESILKTV 450
YSELPSYEVI IPAMLEHGIL QLRENCRLQP GVPLKPMLAK PTKSITEVLD 500
RFEGKDFTCE YKYDGERAQI HFVAHDADME MATTAPSAGK SDRGVSNIFS 550
RNSEDLSKKY PDILAKLPTW IKEGTKSFVL DCETVAWDMV EKKVLPFQQL 600
MTRKKEGFKV CVFAFDILYL NGEALVNKSF RERREHLQDA FIPILLEDSV 650
KASCEGLMVK MLDGPESSYE PSKRSQNWLK VKKDYLAGVG DSLDLVVLGA 700
YFGKGKRTSW YGAFLLACYN PNTQNYESVC NIGTGFSEAI LETLHEQLSE 750
IVIDKPKPFY THSVGNKDQP DVWFEPRYVW EVKTADLTLS PRYRAAADEV 800
SGGGKGISLR FPRFIKERDD KKPDQASTSK MIAEMYQRQE SVSKTKGPSA 850
DDDFEY 856
Length:856
Mass (Da):94,806
Last modified:February 5, 2008 - v2
Checksum:iCAD1185A69AB8B3D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH445334 Genomic DNA. Translation: EAT85591.2.
RefSeqiXP_001797300.1. XM_001797248.1.

Genome annotation databases

EnsemblFungiiSNOT_06940; SNOT_06940; SNOG_06940.
GeneIDi5974190.
KEGGipno:SNOG_06940.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH445334 Genomic DNA. Translation: EAT85591.2 .
RefSeqi XP_001797300.1. XM_001797248.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii SNOT_06940 ; SNOT_06940 ; SNOG_06940 .
GeneIDi 5974190.
KEGGi pno:SNOG_06940.

Phylogenomic databases

KOi K10747.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 3 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Dothideomycete-plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum."
    Hane J.K., Lowe R.G.T., Solomon P.S., Tan K.-C., Schoch C.L., Spatafora J.W., Crous P.W., Kodira C.D., Birren B.W., Galagan J.E., Torriani S.F.F., McDonald B.A., Oliver R.P.
    Plant Cell 19:3347-3368(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SN15 / ATCC MYA-4574 / FGSC 10173.

Entry informationi

Entry nameiQ0UMS4_PHANO
AccessioniPrimary (citable) accession number: Q0UMS4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: February 5, 2008
Last modified: January 22, 2014
This is version 53 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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