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Q0UMS4 (Q0UMS4_PHANO) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length856 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
Q0UMS4 [UniParc].

Last modified February 5, 2008. Version 2.
Checksum: CAD1185A69AB8B3D

FASTA85694,806
        10         20         30         40         50         60 
MAPKQATLGK FFGNPNANTS KQQSKLSFST KPKAQKIDAE IKDELESSTG DVKAEPASTA 

        70         80         90        100        110        120 
EEIEVKQETS GEAMELDSSS SETGKKRPAK EEEEEDSEDE PPMKRQRRKP SKDSEPSKKP 

       130        140        150        160        170        180 
KPAAKKSEKA SVKSNKQPTK VKAAVLEDDD DEVATTALAS KGKKITGKSP TPALPDYDGS 

       190        200        210        220        230        240 
AKEEEEETLS SDEEPEEMKK KAREKVQTAL KSNTKDPYPD WKAGDPVPYA ALCTTFSKIE 

       250        260        270        280        290        300 
MTTKRLEILA HCSLFLRQVL RLTPSDLLPT TLLMINKLAA DYTGVELGIG ESLIKKAISE 

       310        320        330        340        350        360 
STGRTLQHIN SDHNEIGDLG LVAAKSRSKQ PTMFKPKPLT IQGVHKGLLA IATIEGQGAQ 

       370        380        390        400        410        420 
GRKVDGIKKL LSAADSHNAG KHIDIEENKG GPSESKFIVR TLEGKLRLGL AERTVVVALA 

       430        440        450        460        470        480 
QAMIFHEMSQ NGKTPSTTDL GTAESILKTV YSELPSYEVI IPAMLEHGIL QLRENCRLQP 

       490        500        510        520        530        540 
GVPLKPMLAK PTKSITEVLD RFEGKDFTCE YKYDGERAQI HFVAHDADME MATTAPSAGK 

       550        560        570        580        590        600 
SDRGVSNIFS RNSEDLSKKY PDILAKLPTW IKEGTKSFVL DCETVAWDMV EKKVLPFQQL 

       610        620        630        640        650        660 
MTRKKEGFKV CVFAFDILYL NGEALVNKSF RERREHLQDA FIPILLEDSV KASCEGLMVK 

       670        680        690        700        710        720 
MLDGPESSYE PSKRSQNWLK VKKDYLAGVG DSLDLVVLGA YFGKGKRTSW YGAFLLACYN 

       730        740        750        760        770        780 
PNTQNYESVC NIGTGFSEAI LETLHEQLSE IVIDKPKPFY THSVGNKDQP DVWFEPRYVW 

       790        800        810        820        830        840 
EVKTADLTLS PRYRAAADEV SGGGKGISLR FPRFIKERDD KKPDQASTSK MIAEMYQRQE 

       850 
SVSKTKGPSA DDDFEY 

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References

[1]"Dothideomycete-plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum."
Hane J.K., Lowe R.G.T., Solomon P.S., Tan K.-C., Schoch C.L., Spatafora J.W., Crous P.W., Kodira C.D., Birren B.W., Galagan J.E., Torriani S.F.F., McDonald B.A., Oliver R.P.
Plant Cell 19:3347-3368(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SN15 / ATCC MYA-4574 / FGSC 10173.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH445334 Genomic DNA. Translation: EAT85591.2.
RefSeqXP_001797300.1. XM_001797248.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiSNOT_06940; SNOT_06940; SNOG_06940.
GeneID5974190.
KEGGpno:SNOG_06940.

Phylogenomic databases

KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 3 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0UMS4_PHANO
AccessionPrimary (citable) accession number: Q0UMS4
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: February 5, 2008
Last modified: January 22, 2014
This is version 53 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)