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Protein

Alpha-amylase

Gene

SNOG_13401

Organism
Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Septoria nodorum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:SNOG_13401Imported
OrganismiPhaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Septoria nodorum)Imported
Taxonomic identifieri321614 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePhaeosphaeriaceaeParastagonospora
ProteomesiUP000001055 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliQ0U4B3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

InParanoidiQ0U4B3.
KOiK01176.
OMAiWARYNDD.
OrthoDBiEOG7N9051.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015340. A_amylase_DUF1966_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF00686. CBM_20. 1 hit.
PF09260. DUF1966. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q0U4B3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLFLQCIVAY FLCLISFVSA ADSNAWKSRS IYFVLTDRIA RSSSDTGGSA
60 70 80 90 100
CGNLGNYCGG TFKGLESKLD YIQNLGFDSI WITPVVANSA GGYHGYWAQD
110 120 130 140 150
LYSINSNYGT AADLKSLVST AHSKGMYVMV DVVANHMGQG AISDNKPSPL
160 170 180 190 200
NQASAYHSDC DIDYNNQTSI EVCRIARLPD LNTQSSEIKN VLNTWVNWLV
210 220 230 240 250
KEYTFDGVRI DTVKHVQQDF WPDFAKAAGV YSIGEVWDGN PTYLAQYAKL
260 270 280 290 300
MPGLLNYATY YPMNRFYQQT GSSQDLVDMM NTVASTFPDP SALGTFIDNH
310 320 330 340 350
DNARWLSVKN DQTLLKNALA FVILSRGIPI LYYGTEQAYA GGNDPANRED
360 370 380 390 400
LWRSGFNTNT NMYQAIKKLT AARKAAGGLG GNDHVHIYVA STAYAWSRAG
410 420 430 440 450
GNLIVLTTNS GSSSNAQHCF NAQKANGRWT DVFSGSSNVI SSDGNGQVCV
460 470 480 490 500
TVSQGNPIVL LATSAGSTPT TLRTSAAPAP TGSCPTTVSV TFTERVVTQP
510 520 530 540 550
GDTIKIVGNT AQLGNWNPSN APAMSASSYT SSNPVWTINL SMAAGSAVQY
560 570 580
KYVKVSSTGT ATWESDPNRA YSVPSCQASA SVSNTWQ
Length:587
Mass (Da):63,248
Last modified:September 5, 2006 - v1
Checksum:i8053A17A2888EC0C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH445350 Genomic DNA. Translation: EAT79285.1.
RefSeqiXP_001803613.1. XM_001803561.1.

Genome annotation databases

EnsemblFungiiSNOT_13401; SNOT_13401; SNOG_13401.
GeneIDi5980530.
KEGGipno:SNOG_13401.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH445350 Genomic DNA. Translation: EAT79285.1.
RefSeqiXP_001803613.1. XM_001803561.1.

3D structure databases

ProteinModelPortaliQ0U4B3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSNOT_13401; SNOT_13401; SNOG_13401.
GeneIDi5980530.
KEGGipno:SNOG_13401.

Phylogenomic databases

InParanoidiQ0U4B3.
KOiK01176.
OMAiWARYNDD.
OrthoDBiEOG7N9051.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015340. A_amylase_DUF1966_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF00686. CBM_20. 1 hit.
PF09260. DUF1966. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Dothideomycete-plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum."
    Hane J.K., Lowe R.G., Solomon P.S., Tan K.C., Schoch C.L., Spatafora J.W., Crous P.W., Kodira C., Birren B.W., Galagan J.E., Torriani S.F., McDonald B.A., Oliver R.P.
    Plant Cell 19:3347-3368(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SN15 / ATCC MYA-4574 / FGSC 10173Imported.

Entry informationi

Entry nameiQ0U4B3_PHANO
AccessioniPrimary (citable) accession number: Q0U4B3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: July 22, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.