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Q0TTV3

- Q0TTV3_CLOP1

UniProt

Q0TTV3 - Q0TTV3_CLOP1

Protein

dTDP-glucose 4,6-dehydratase

Gene

rfbB

Organism
Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (05 Sep 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    dTDP-alpha-D-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O.UniRule annotation

    Cofactori

    NAD.UniRule annotation

    GO - Molecular functioni

    1. coenzyme binding Source: InterPro
    2. dTDP-glucose 4,6-dehydratase activity Source: UniProtKB-EC

    GO - Biological processi

    1. nucleotide-sugar metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciCPER195103:GHAW-497-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    dTDP-glucose 4,6-dehydrataseUniRule annotation (EC:4.2.1.46UniRule annotation)
    Gene namesi
    Name:rfbBImported
    Ordered Locus Names:CPF_0482Imported
    OrganismiClostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A)Imported
    Taxonomic identifieri195103 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
    ProteomesiUP000001823: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi195103.CPF_0482.

    Structurei

    3D structure databases

    ProteinModelPortaliQ0TTV3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1088.
    HOGENOMiHOG000168006.
    KOiK01710.
    OMAiNANIEFR.
    OrthoDBiEOG6PZXCX.

    Family and domain databases

    Gene3Di3.40.50.720. 1 hit.
    InterProiIPR005888. dTDP_Gluc_deHydtase.
    IPR001509. Epimerase_deHydtase.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view]
    PANTHERiPTHR10366:SF41. PTHR10366:SF41. 1 hit.
    PfamiPF01370. Epimerase. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR01181. dTDP_gluc_dehyt. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q0TTV3-1 [UniParc]FASTAAdd to Basket

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    MKTYLVTGGA GFIGSNFVLY MLKKYKDIKI INLDKLTYAG NLENLKSIEN    50
    DERHIFVQGD ICDKELVSSL FEKYEIDYVA HFAAESHVDR SIREPEVFAK 100
    TNVLGTVNLL NCAKNAWETE EGWKEGVKFL HVSTDEVYGS LGETGYFMET 150
    TPLDPHSPYS SSKASSDLMV KAYADTYKMP VNITRCSNNY GPFQFPEKLI 200
    PLLINNCLNH KDLPVYGDGM NIRDWLFVED HAKAIDMVIN GGRLGEVYNV 250
    GGHNERTNIQ IVKTVIEYLH DNVDEEITEN LIKYVEDRKG HDRRYGIDPT 300
    KIKEELGWYP ETTFEVGIKK TIKWYLDNKE WMENVTSGDY QKYYEKMYK 349
    Length:349
    Mass (Da):40,268
    Last modified:September 5, 2006 - v1
    Checksum:iD3CB1AEB929364E4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000246 Genomic DNA. Translation: ABG82897.1.
    RefSeqiWP_011590217.1. NC_008261.1.
    YP_694937.1. NC_008261.1.

    Genome annotation databases

    EnsemblBacteriaiABG82897; ABG82897; CPF_0482.
    GeneIDi4202087.
    KEGGicpf:CPF_0482.
    PATRICi19483268. VBICloPer106549_0462.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000246 Genomic DNA. Translation: ABG82897.1 .
    RefSeqi WP_011590217.1. NC_008261.1.
    YP_694937.1. NC_008261.1.

    3D structure databases

    ProteinModelPortali Q0TTV3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 195103.CPF_0482.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABG82897 ; ABG82897 ; CPF_0482 .
    GeneIDi 4202087.
    KEGGi cpf:CPF_0482.
    PATRICi 19483268. VBICloPer106549_0462.

    Phylogenomic databases

    eggNOGi COG1088.
    HOGENOMi HOG000168006.
    KOi K01710.
    OMAi NANIEFR.
    OrthoDBi EOG6PZXCX.

    Enzyme and pathway databases

    BioCyci CPER195103:GHAW-497-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.720. 1 hit.
    InterProi IPR005888. dTDP_Gluc_deHydtase.
    IPR001509. Epimerase_deHydtase.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view ]
    PANTHERi PTHR10366:SF41. PTHR10366:SF41. 1 hit.
    Pfami PF01370. Epimerase. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR01181. dTDP_gluc_dehyt. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 13124 / NCTC 8237 / Type AImported.

    Entry informationi

    Entry nameiQ0TTV3_CLOP1
    AccessioniPrimary (citable) accession number: Q0TTV3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 5, 2006
    Last sequence update: September 5, 2006
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3