Q0TT67 (Q0TT67_CLOP1) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 41.
History...
Names and origin
| Protein names | Submitted name: Sialidase EMBL ABG83208.1 | ||||
| Gene names |
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| Organism | Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 195103 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium |
Protein attributes
| Sequence length | 694 AA. |
| Sequence status | Complete. |
| Protein existence | Predicted |
Ontologies
| Keywords | |
|---|---|
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | exo-alpha-sialidase activity Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. Paulsen I.T.Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000246 Genomic DNA. Translation: ABG83208.1. |
| RefSeq | YP_695173.1. NC_008261.1. |
3D structure databases | |
| ProteinModelPortal | Q0TT67. |
| SMR | Q0TT67. Positions 42-236, 243-690. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q0TT67. |
Protein family/group databases | |
| CAZy | CBM40. Carbohydrate-Binding Module Family 40. GH33. Glycoside Hydrolase Family 33. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4202671. |
| GenomeReviews | Gene locus CPF_0721 in contig CP000246_GR. |
| KEGG | cpf:CPF_0721. |
| PATRIC | 19483744. VBICloPer106549_0694. |
| TIGR | CPF_0721. |
Phylogenomic databases | |
| eggNOG | COG4409. |
| HOGENOM | HBG061761. |
| OMA | DWMKFLG. |
| ProtClustDB | CLSK518658. |
Family and domain databases | |
| InterPro | IPR002860. BNR_rpt. IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR004124. Glyco_hydro_33_N. IPR011040. Neuraminidase. IPR023364. Trans_sialidase_dom3. [Graphical view] |
| Gene3D | G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.40.220.10. G3DSA:2.40.220.10. 1 hit. G3DSA:2.120.10.10. Neuraminidase. 2 hits. |
| KO | K01186. |
| Pfam | PF02012. BNR. 4 hits. PF02973. Sialidase. 1 hit. [Graphical view] |
| SUPFAM | SSF49899. ConA_like_lec_gl. 1 hit. SSF50939. Sialidase. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | Q0TT67_CLOP1 | ||||||||
| Accession | Primary (citable) accession number: Q0TT67 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
