Q0TSY7 (Q0TSY7_CLOP1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase, family 13 EMBL ABG82385.1

Gene names

Ordered Locus Names:

CPF_0802

Organism

Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) [Complete proteome] [HAMAP]

Taxonomic identifier

195103 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	610 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABG82385.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0TSY7 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: 0884D4DF1A842E90	FASTA	610	71,561
	10 20 30 40 50 60 MGKITREAIH HIAQSNYSYG YDNETLHLRV KTKKGEVNKV EIRIGDPYIW DEGGCDGGNM 70 80 90 100 110 120 NATGGRWTGG KSYPMRKECE TKYFDHWIVE YKPLTKRSRY GFILYGDEET LLFTEKRIEE 130 140 150 160 170 180 LDGKYDEAKL SDIGNFYCFP YLNAIDVAKT PKWVKDTVWY QIFPDRFCNG DKSIDPENVE 190 200 210 220 230 240 PWGTEPTRDN FMGGDLQGVL DKLDYLCDLG INGLYFCPVF EATENHRYET IDYFKVDPAL 250 260 270 280 290 300 GGNEVFKKLV SEAHKRGMKI MLDAVFNHIG YFSPQWQEVL KNNEKSRYKD WFCIKKFPVL 310 320 330 340 350 360 ENGLENVDGN NLNYETFGRI ATMPKLNTEN PEVVEYLLKV AKFWVEEMDI DGWRLDVCNE 370 380 390 400 410 420 VDHVFWRKFR EVVKGTNKEV YILGEVWHDG LPWLMGDQFD AVMNYPVTDA VKEYFCLNQS 430 440 450 460 470 480 NTEDFKYMIE ANKVSYLRQI GETIFNLLDS HDTPRILTVA EGNKDKMKLA YLFMFTQAGS 490 500 510 520 530 540 PCIYYGDEVG MEGNQGMGME FHRRCMVWDE NKQDKDMLKF MKQIIKIRKE NKELNLLDNN 550 560 570 580 590 600 WIRANRAENI LIYSKENIFI IMNNSENEEK IYLPKEIKNN KVKDLFEEKI EPLKEDIGLK 610 PFAFKVYKKL

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000246 Genomic DNA. Translation: ABG82385.1.
RefSeq	YP_695253.1. NC_008261.1.
3D structure databases
ProteinModelPortal	Q0TSY7.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0TSY7.
Protein family/group databases
CAZy	CBM34. Carbohydrate-Binding Module Family 34. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4200952.
GenomeReviews	Gene locus CPF_0802 in contig CP000246_GR.
KEGG	cpf:CPF_0802.
PATRIC	19483904. VBICloPer106549_0774.
TIGR	CPF_0802.
Phylogenomic databases
eggNOG	COG0366.
HOGENOM	HBG726713.
OMA	ETVWYQI.
ProtClustDB	CLSK630928.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR004185. Glyco_hydro_13_lg-like_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02903. Alpha-amylase_N. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0TSY7_CLOP1

Accession

Primary (citable) accession number: Q0TSY7

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)