Q0TSF8 (Q0TSF8_CLOP1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sialidase EMBL ABG84018.1
EC=3.2.1.18 EMBL ABG84018.1

Gene names

Name:	nanH EMBL ABG84018.1
Ordered Locus Names:	CPF_0985

Organism

Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) [Complete proteome] [HAMAP] EMBL ABG84018.1

Taxonomic identifier

195103 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium perfringens

Protein attributes

Sequence length	382 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABG84018.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pathogenesis Inferred from electronic annotation. Source: InterPro
Molecular_function	exo-alpha-(2->3)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->6)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->8)-sialidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0TSF8 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: FCE9468348668541	FASTA	382	42,803
	10 20 30 40 50 60 MYNKNNTFEK NLDISHKPEP LILFNKDNNI WNSKYFRIPN IQLLNDGTIL TFSDIRYNGP 70 80 90 100 110 120 DDHAYIDIAS ARSTDFGKTW SYDIAMKNNR IDSTYSRVMD STTVITNTGR IILIAGSWNT 130 140 150 160 170 180 NGNWAMTTST RRSDWSVQMI YSDDNGLTWS NKIDLTKDSS KVKNQPSNTI GWLGGVGSGI 190 200 210 220 230 240 VMDDGTIVMP AQISLRENNE NNYYSLIIYS KDNGETWTMG NKVPNSNTSE NMVIELDGAL 250 260 270 280 290 300 IMSTRYDYSG YRAAYISHDL GTTWEIYEPL NGKVLTGKGS GCQGSFIKAT TSNGHRIGLI 310 320 330 340 350 360 SAPKNTKGEY IRDNIAVYMI DFDDLSKGVQ EICIPYPEDG NKLGGGYSCL SFKNGHLGIV 370 380 YEANGNIEYQ DLTPYYSLIN KQ

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., Deboy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13124 / NCTC 8237 / Type A.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000246 Genomic DNA. Translation: ABG84018.1.
RefSeq	YP_695432.1. NC_008261.1.
3D structure databases
ProteinModelPortal	Q0TSF8.
ModBase	Search...
Protein-protein interaction databases
STRING	195103.CPF_0985.
Protein family/group databases
CAZy	GH33. Glycoside Hydrolase Family 33.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABG84018; ABG84018; CPF_0985.
GeneID	4201816.
KEGG	cpf:CPF_0985.
PATRIC	19484264. VBICloPer106549_0952.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4409.
HOGENOM	HOG000119872.
KO	K01186.
OMA	YEANGNI.
ProtClustDB	CLSK516277.
Enzyme and pathway databases
BioCyc	CPER195103:GHAW-1082-MONOMER.
Family and domain databases
Gene3D	2.120.10.10. 1 hit.
InterPro	IPR026948. Sialidase. IPR026856. Sialidase_fam. IPR008377. Sialidase_trypan. IPR011040. Sialidases. [Graphical view]
PANTHER	PTHR10628. PTHR10628. 1 hit. PTHR10628:SF5. PTHR10628:SF5. 1 hit.
PRINTS	PR01803. TCSIALIDASE.
SUPFAM	SSF50939. Sialidase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q0TSF8_CLOP1

Accession

Primary (citable) accession number: Q0TSF8

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)