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Q0TRS3 (Q0TRS3_CLOP1) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Beta-galactosidase EMBL ABG84474.1
EC=3.2.1.23 EMBL ABG84474.1
Gene names
Name:lacZ EMBL ABG84474.1
Ordered Locus Names:CPF_1221
OrganismClostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) [Complete proteome] [HAMAP]
Taxonomic identifier195103 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length1455 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. SAAS SAAS023230

Sequences

Sequence LengthMass (Da)Tools
Q0TRS3 [UniParc].

Last modified September 5, 2006. Version 1.
Checksum: 3B0C557E6587BC73

FASTA1,455166,261
        10         20         30         40         50         60 
MFSKKTIANI LSIALFSNIV INNFSINEVL ANVKKVKIED GVFWANNPEK FEDNREKAHA 

        70         80         90        100        110        120 
TLMPFNSIEE ALNNPNYSDY SNSENYMSLN GEWKFNLVET YDKDIKDFYK TDFDSSSWNT 

       130        140        150        160        170        180 
IPVPSSWQLH GYDQPRYNDT AYPWEYQDNI PEPPDVPTDY NPIGYYKKTF TIPEGWDNKE 

       190        200        210        220        230        240 
VFVSFQGVES AYYLYINGEY VGYSEDSFTG HDFNIGKFLK EGENEISVKV HRWSDGSWLE 

       250        260        270        280        290        300 
SQDMIKLSGI FRDVFLYSTP KAHIRDYTLV TDLDDKYRDS NLNVEIDISN YGIKAGKYKI 

       310        320        330        340        350        360 
KGILYDENKK IVNEDISEFE LNDEENVLVS INTRVENPKK WTAETPNLYT YVIALENENG 

       370        380        390        400        410        420 
EVVETISNKF GFRKIEIKNN QVCINGQPIS FKGVNRHEFL PDTGRTLTEE SMIEDIKLMK 

       430        440        450        460        470        480 
KNNINAVRSS HYPNDPRWYD LCNEYGLYVM DEANLETHGR LDDIPQSRPE WTEAVIDRQR 

       490        500        510        520        530        540 
SMLERSKNET SIIMWSLGNE SSGGENFEIA AKWIKENDPT RLVHYEAERT VGDVYSRMYR 

       550        560        570        580        590        600 
TIEEMEAYAN DPDNKKPYIQ CEYAHGMGNS IGNLQKYWDV FDKYDIMQGG FIWDWADQAI 

       610        620        630        640        650        660 
RMKDKNTGEE FLSYGGDWGD SEFTDGNFCA NGLVSADRTV QPELQEVKKV YQEIEIEDID 

       670        680        690        700        710        720 
ILNGKVKIVN EHLFTNLNKY KGKWELRADD NILQNGELDI SVDPLSSKEF TIPFKKPELS 

       730        740        750        760        770        780 
PGVEYWLNIS FELKDDEPWA EKGYVISKEQ FKLPFDNEME KGIDLNSMNS IELKNDENNV 

       790        800        810        820        830        840 
QIIGDGFKVS FDKKLGALES YKIDKEGNEI ELIEEPIRPN YWRAPNDNDK GFGAEERFDT 

       850        860        870        880        890        900 
WRYAGANAKV ENLEVIEVGD KAVKVNVDFI LPTNIESKLN VEYIVYGNGE VSVNNTLNAS 

       910        920        930        940        950        960 
KGLSEIPEIG MMLKLPKEFD SITWYGRGPE ENYIDRNTGY DIGVYNKNVK DFFFPYLEPS 

       970        980        990       1000       1010       1020 
ETGNRTDTRW VTLTNNNGVG LMASGIPSIE FNALQYTPEE LSSGKRHPHE LAKEDSIVLR 

      1030       1040       1050       1060       1070       1080 
INHRQMGVGG DNSWGATPHR EFMNESGKIY NYSFKIKGID KSSSPMEISK KNLKEDLIKD 

      1090       1100       1110       1120       1130       1140 
IKIDGVSLRG FNENITEYNI DYLEKTLEKP PVIEVVKAND NIDVEVENVY TIPGKATIKV 

      1150       1160       1170       1180       1190       1200 
NHKDELLNKI YTKEYVINFG THNVEYLSDI SWKSATSGMY EPVKDRSVVN NPLVLKIDGE 

      1210       1220       1230       1240       1250       1260 
IKTFDKGVGV NSNSEIVVDL KGKGYEKFEA YVGMDRGVSG YGSSIVARVE VDGKEVFNSE 

      1270       1280       1290       1300       1310       1320 
KIYSTSNCHK VEVDLKGAEK LALYIDDYDN NIKYDHGNWA DAKFIKAEAN KDTSLKALKV 

      1330       1340       1350       1360       1370       1380 
NGENLKGFNT NTFEYDVNLS KDSHIPKIEA IAMNENSKVF IEDALSIPGT SYIKVISEAS 

      1390       1400       1410       1420       1430       1440 
TMKTYKINFE LNGNSTEDDE KPGDVEKPND NDLDENNKPE DSEGLPNTGQ SVINFAIIGI 

      1450 
ISSLAGVKLL RRKNK

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000246 Genomic DNA. Translation: ABG84474.1.
RefSeqYP_695667.1. NC_008261.1.

3D structure databases

ProteinModelPortalQ0TRS3.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ0TRS3.

Protein family/group databases

CAZyCBM51. Carbohydrate-Binding Module Family 51.
GH2. Glycoside Hydrolase Family 2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4203932.
GenomeReviewsGene locus CPF_1221 in contig CP000246_GR.
KEGGcpf:CPF_1221.
PATRIC19484714. VBICloPer106549_1177.
TIGRCPF_1221.

Phylogenomic databases

eggNOGCOG3250.
HOGENOMHBG670643.
OMADASWLED.

Family and domain databases

InterProIPR004199. B-gal_small/dom_5.
IPR008979. Galactose-bd-like.
IPR013222. Glyco_hyd_98_carb-bd.
IPR011013. Glyco_hydro-type_carb-bd.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023230. Glyco_hydro_2_CS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR019931. LPXTG-motif_cell_wall_anchor.
[Graphical view]
Gene3DG3DSA:2.60.40.320. Glyco_hydro_2/20_Ig-like. 2 hits.
G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK01190.
PfamPF02929. Bgal_small_N. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
PF08305. NPCBM. 1 hit.
[Graphical view]
PRINTSPR00132. GLHYDRLASE2.
SMARTSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMSSF49785. Gal_bind_like. 1 hit.
SSF74650. Gal_mut_like. 1 hit.
SSF49303. Glyco_hydro_2Ig. 2 hits.
SSF51445. Glyco_hydro_cat. 1 hit.
TIGRFAMsTIGR01167. LPXTG_anchor. 1 hit.
PROSITEPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ0TRS3_CLOP1
AccessionPrimary (citable) accession number: Q0TRS3
Entry history
Integrated into UniProtKB/TrEMBL: September 5, 2006
Last sequence update: September 5, 2006
Last modified: January 25, 2012
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info