Q0TR25 (Q0TR25_CLOP1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative alpha-N-acetylgalactosaminidase EMBL ABG83191.1

Gene names

Ordered Locus Names:

CPF_1472

Organism

Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) [Complete proteome] [HAMAP]

Taxonomic identifier

195103 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	1588 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 fibronectin type-III domain. RuleBase RU000718

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell adhesion Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0TR25 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: E476E5D1447FD954	FASTA	1,588	178,191
	10 20 30 40 50 60 MQVNKLSKKS LSLTLGLSVA LTNTAPLSVL ANGSKVEDVV ASKSQDKITI GNEYISREFS 70 80 90 100 110 120 IENGKVLTSE IENSRANTTL VPQLGSEDFI INTIQENSDL PEVEANSPKE VLDRANWNAT 130 140 150 160 170 180 LTANSGTAYP ATDIEKLFDG DKNTYIDSYN ITGYPTSLKI DLGEVKTVSS FSYQKRPGFT 190 200 210 220 230 240 DANYGKNGTM GQYKLYVSED GENWTEAGEG EFTREDFNLH QEGNLHNVGD VVYGNFDKTY 250 260 270 280 290 300 ESRYIRIDQL SDALGNTQEF SGAEINLYSD KYEKPEEPIA PKTAIKSSDL TIDTSSTKIE 310 320 330 340 350 360 DIENGKKLTI SYEPYDFNGT EYDIDMVTVL ENDDHYMRSF LEIKTNNENA KIDYIDLDHF 370 380 390 400 410 420 ILEDGIKDTL WSHPDLEDVT SILIGKNELM LGQPIYANGM FFGSEFPATD TDVVNDGMQI 430 440 450 460 470 480 RYYSGKSFEE LERDNQLTTD GKFVSWQNVV GAAKGVDTDV VQTDFFEYIS EIATPTDFRK 490 500 510 520 530 540 QYNSWYDNML TITDESISKS FYGTEKGLTE NGVEPIDSYV VDDGWHNYRD PEFNPNISKE 550 560 570 580 590 600 QAGNSMNRTG FWEFNDKFPN ELYTSTELTS KFQSKFGLWL GPQGGYNFYG GFARYLEKMG 610 620 630 640 650 660 TGYAQTNNGV NVCVGSDRYI KNLTSLFLDY QERFDIDYWK LDGFALRPCT SENHDHMTGG 670 680 690 700 710 720 HNNMYYTTDL WEKWTDAWET MRASRAEEGK DLFINATCYV NLSPWILQWV NTVWIQNSQD 730 740 750 760 770 780 TGEAGTGSRH QQKITYRDAV YHDIYKSNQI QFPAKNIYNH EPIYGVSDGS FATTEDFRDF 790 800 810 820 830 840 LFANAVRGTA FWELYYSPSI MDDEKWKVNA DVLDFVENNF NVLEKAKLFG HRATEGVYGY 850 860 870 880 890 900 SAWDGNEGIV SFRNPTGETK EYTLELIDIV GVPKSVSNLK GNQVLPYKVG DIGSVSYGDS 910 920 930 940 950 960 ITVTLEPYET RILQYGKVDN KASEIVSAKV TGENEITIKY NERVENGEGV YSVEGNEIIE 970 980 990 1000 1010 1020 SKLLDDYRTV VISTSNKLQG EAKLNINGER DALQNPLTTS LTIPVYNNGK IVSVQSGEEL 1030 1040 1050 1060 1070 1080 IGGENINKKY NGNSDTYFLE MNKAYEVDTN ESFKGKTDFA ISMAINTTSS NVNLLSQGEE 1090 1100 1110 1120 1130 1140 IKLSIDEEGY VNFKVKDLNL TSKSEVTTVT EKAHGTFGTN EYVETSTEST FVGKVNDGKL 1150 1160 1170 1180 1190 1200 HHISAVREVN GVLKVYIDGE LMNSVYDKSL INQEINGGTI MVSDNNFTGV IGDIELRNSS 1210 1220 1230 1240 1250 1260 IYYDEAKELY NSYEGSDIIE YSRENWATSA CSEMNPPSGN DGPASYAIDG NESTLWHTNY 1270 1280 1290 1300 1310 1320 VGGDNHSGNH WLSVDFGEEL DFDTVNVLSR GKEINGSIKG YKLEANINGE WAFVKEGEFT 1330 1340 1350 1360 1370 1380 DGVKEKIELD EAIKASGIKL TALSTFNGQN FAAVREISVT KKDREATEDE INELKALVKE 1390 1400 1410 1420 1430 1440 INKEDYTKAT ANRYIKVAEK VNALDKINLS QLDRLRSDLN KAYEGLVEAR ELNKTLVEAG 1450 1460 1470 1480 1490 1500 KLIKEDYTIE SWTVFEEALN HAKDLNNDIE ATKEGVDEAT SRLKEAMNSL EKVNNEGEIV 1510 1520 1530 1540 1550 1560 NGPVNNFEAS EIAKKNVTVT WSAPESTKGL EGYALYKDGK KVAEIGAEET SYKFKGLNRH 1570 1580 TIYNFKIAAK YSNGELSKKE SITLRTAR

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000246 Genomic DNA. Translation: ABG83191.1.
RefSeq	YP_695915.1. NC_008261.1.
3D structure databases
ProteinModelPortal	Q0TR25.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0TR25.
Protein family/group databases
CAZy	CBM32. Carbohydrate-Binding Module Family 32. GH36. Glycoside Hydrolase Family 36.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4203492.
GenomeReviews	Gene locus CPF_1472 in contig CP000246_GR.
KEGG	cpf:CPF_1472.
PATRIC	19485206. VBICloPer106549_1423.
TIGR	CPF_1472.
Phylogenomic databases
HOGENOM	HBG426759.
OMA	EANINGE.
ProtClustDB	CLSK519024.
Family and domain databases
InterPro	IPR000421. Coagulation_fac_5/8-C_type_dom. IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR003961. Fibronectin_type3. IPR008979. Galactose-bd-like. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
Pfam	PF00754. F5_F8_type_C. 2 hits. PF00041. fn3. 1 hit. [Graphical view]
SMART	SM00060. FN3. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF49265. FN_III-like. 1 hit. SSF49785. Gal_bind_like. 2 hits. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS50022. FA58C_3. 2 hits. PS50853. FN3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0TR25_CLOP1

Accession

Primary (citable) accession number: Q0TR25

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)