Q0TP82 (Q0TP82_CLOP1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Calx-beta domain protein EMBL ABG83106.1

Gene names

Ordered Locus Names:

CPF_2130

Organism

Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) [Complete proteome] [HAMAP]

Taxonomic identifier

195103 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	932 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell adhesion Inferred from electronic annotation. Source: InterPro cell communication Inferred from electronic annotation. Source: InterPro polysaccharide catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-L-fucosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q0TP82 [UniParc]. Last modified September 5, 2006. Version 1. Checksum: F145C94722CB5B01	FASTA	932	103,826
	10 20 30 40 50 60 MKVRAIKSFL ATTMAMTFLV SMGQGSILTK ANTINNMKYV TEAFGAIPTE EQVSYQKEEL 70 80 90 100 110 120 TAFIHFGVNT FTGREWGDGT ENPEIFNPTN LDADQWVKTL ADAGFGRVIL TAKHHDGFCL 130 140 150 160 170 180 WDSAYTKHDV ASSPWKNGKG DVVKEVSEAC AKYNIKFGVY LSPWDQNSEH YGEGNGGDYN 190 200 210 220 230 240 EFYMNQLREL LTNYGPIAEV WMDGAKGSNV KQEYNFEEWF ALIKELQPEC LIFSPQGPDI 250 260 270 280 290 300 RWIGNEKGYA GEPCWSTIDI EKMKERENPT YLNNGEEGGS DWVVGESDVS IRPGWFYHES 310 320 330 340 350 360 QDNEVKSLEK MMDIYFKSIG RNSVLLLNVP PNKEGKLHEN DVNRLKEFGE TIKELFNDDL 370 380 390 400 410 420 ALNKEVIVDS FANRDETYGA NKIVDGDYDT YWAPDNSSKT GTIEIDLGGS KEFDVISLQE 430 440 450 460 470 480 YIPLGQRVSS FNIEVLQGEN WNKVYEGKTI GYKRLIRISP TKGEKIRINI TGSLEVPLIN 490 500 510 520 530 540 NVGVYKQPIS IELPSGPPAG LKVLNDDNKG NELEQFNFSD GWVYETIHGE NDLGGDAHYT 550 560 570 580 590 600 SKTNATVNIK FNGTKFFLSG TKDSGHGIME ISIDGENPVE VDLYSPNRKC KEIVFESEDL 610 620 630 640 650 660 SDGEHEVTVK CTGRKNSSSR GTAAHIDGAY VLDNGGKGMV EFEKVGYEVS ENIGTATFKV 670 680 690 700 710 720 IRKGGSNGKL EVNYDTLAGT ALNGVDYQTW SGTLAFNEGE TEKTFDITII DDKEKEEPKE 730 740 750 760 770 780 FYLKLSDPIG GILGFNSRAT VTINDDEQIK IETKDTGDGL HQFNFSGGWN KETDGAWTNN 790 800 810 820 830 840 MNSTFSIKFR GKQISLIGAK DPNHGIYEIS IDGGEFVEVD AYAESRVTNQ VIYESEVLTS 850 860 870 880 890 900 GEHILNFRLK GENPHGGRAD GQLNYALVDT SEDNLVEPEM PTTDLNKDGK VDIGDLSLAS 910 920 930 KHYGENIKEY DINGDGVIDE FELNSITNDI LK

References

[1]

"Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens." Myers G.S.A., Rasko D.A., Cheung J.K., Ravel J., Seshadri R., DeBoy R.T., Ren Q., Varga J., Awad M.M., Brinkac L.M., Daugherty S.C., Haft D.H., Dodson R.J., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Khouri H. , Dimitrov G.I., Watkins K.L., Mulligan S., Benton J., Radune D., Fisher D.J., Atkins H.S., Hiscox T., Jost B.H., Billington S.J., Songer J.G., McClane B.A., Titball R.W., Rood J.I., Melville S.B., Paulsen I.T. Genome Res. 16:1031-1040(2006) [PubMed: 16825665] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000246 Genomic DNA. Translation: ABG83106.1.
RefSeq	YP_696558.1. NC_008261.1.
3D structure databases
ProteinModelPortal	Q0TP82.
ModBase	Search...
Protein-protein interaction databases
STRING	Q0TP82.
Protein family/group databases
CAZy	GH29. Glycoside Hydrolase Family 29.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4201342.
GenomeReviews	Gene locus CPF_2130 in contig CP000246_GR.
KEGG	cpf:CPF_2130.
PATRIC	19486512. VBICloPer106549_2074.
TIGR	CPF_2130.
Phylogenomic databases
eggNOG	COG3669.
HOGENOM	HBG061610.
OMA	IRINITG.
ProtClustDB	CLSK519264.
Family and domain databases
InterPro	IPR003644. Calx_beta. IPR016134. Cellulos_enz_dockerin_1. IPR000421. Coagulation_fac_5/8-C_type_dom. IPR018247. EF_Hand_1_Ca_BS. IPR008979. Galactose-bd-like. IPR000933. Glyco_hydro_29. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:1.10.1330.10. Cellulos_enz_dockerin_1. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10030. Glyco_hydro_29. 1 hit.
Pfam	PF01120. Alpha_L_fucos. 1 hit. PF03160. Calx-beta. 1 hit. PF00754. F5_F8_type_C. 1 hit. [Graphical view]
SMART	SM00812. Alpha_L_fucos. 1 hit. SM00237. Calx_beta. 1 hit. [Graphical view]
SUPFAM	SSF63446. Cellulos_enz_dockerin_1. 1 hit. SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00018. EF_HAND_1. 2 hits. PS50022. FA58C_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q0TP82_CLOP1

Accession

Primary (citable) accession number: Q0TP82

Entry history

Integrated into UniProtKB/TrEMBL:	September 5, 2006
Last sequence update:	September 5, 2006
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)